RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TSC22D4Q9Y3Q8 395 aa13.28□□□□□ -0.28
ATG4B-218ENST00000479554 TNPO3Q9Y5L0 923 aaKnown RBP13.28□□□□□ -0.28
ATG4B-218ENST00000479554 OTOGQ6ZRI0 2925 aa13.28□□□□□ -0.28
ATG4B-218ENST00000479554 A0A0G2JMM0 328 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 A0A1W2PPB8 328 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 A0A1W2PPM1 405 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 A0A1W2PRS3 328 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 PINLYPA6NC86 204 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 FAM166BA8MTA8 275 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 KIR3DP1A8MWS1 328 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 G3V3Y1 287 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ADAM10O14672 748 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 KRT4P19013 534 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 PTX3P26022 381 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ARFIP1P53367 373 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 PPIAP62937 165 aaKnown RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 FOLH1Q04609 750 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 BIKQ13323 160 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 PCBP2Q15366 365 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■■ 27.4
ATG4B-218ENST00000479554 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF750Q32MQ0 723 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 TECRLQ5HYJ1 363 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 C18orf63Q68DL7 685 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 TTC19Q6DKK2 380 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 METTL2BQ6P1Q9 378 aaKnown RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 PAOXQ6QHF9 649 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 TIFABQ6ZNK6 161 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 RGS9BPQ6ZS82 235 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 GOLM1Q8NBJ4 401 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF721Q8TF20 911 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 TANKQ92844 425 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 SDCCAG3Q96C92 435 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 SCYL1Q96KG9 808 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ART5Q96L15 291 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 GPR78Q96P69 363 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 TTTY12Q9BZ98 90 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 DEFB127Q9H1M4 99 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 IPPKQ9H8X2 491 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 LYARQ9NX58 379 aaKnown RBP13.27□□□□□ -0.29
ATG4B-218ENST00000479554 COQ3Q9NZJ6 369 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 ATG4BQ9Y4P1 393 aa13.27□□□□□ -0.29
ATG4B-218ENST00000479554 C19orf84I3L1E1 186 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SPAG7O75391 227 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PDE9AO76083 593 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 ZWINTO95229 277 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SIX3O95343 332 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 NR2F6P10588 404 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 ALOX15P16050 662 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CNR1P21554 472 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SLC18A2Q05940 514 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 ASPHQ12797 758 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CUL3Q13618 768 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 NDUFAF5Q5TEU4 345 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CYP20A1Q6UW02 462 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CSMD2Q7Z408 3487 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 C9orf40Q8IXQ3 194 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 C4orf33Q8N1A6 199 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PTGR2Q8N8N7 351 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 L3MBTL4Q8NA19 623 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 NUBPLQ8TB37 319 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CA5BP1Q8WTZ4 195 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 DYDC1Q8WWB3 177 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PPWD1Q96BP3 646 aaKnown RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 RBM18Q96H35 190 aaKnown RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SENP5Q96HI0 755 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 FBXL20Q96IG2 436 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SGCZQ96LD1 299 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 FAM173AQ9BQD7 235 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PELOQ9BRX2 385 aaKnown RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CNPPD1Q9BV87 410 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 CCDC134Q9H6E4 229 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SACM1LQ9NTJ5 587 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATG4B-218ENST00000479554 RNF11Q9Y3C5 154 aa13.26□□□□□ -0.29
ATG4B-218ENST00000479554 PCNX1Q96RV3 2341 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 AKAP9Q99996 3911 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 A0A0A6YYD5 115 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 PROM1O43490 865 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 TYROBPO43914 113 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 OR10H2O60403 315 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 ZNF354AO60765 605 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 CLDN9O95484 217 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 IGKV3-11P04433 115 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 P04436 131 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 FAM58BPP0C7Q3 252 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 CCL3P10147 92 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 MPP2Q14168 576 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 MPEG1Q2M385 716 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 TMEM211Q6ICI0 200 aa13.25□□□□□ -0.29
ATG4B-218ENST00000479554 MRM1Q6IN84 353 aaKnown RBP13.25□□□□□ -0.29
ATG4B-218ENST00000479554 DGAT2L6Q6ZPD8 337 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms