RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 KCNJ9Q92806 393 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 LPPQ93052 612 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 HIST1H2AHQ96KK5 128 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 HIST1H2AJQ99878 128 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 ACPTQ9BZG2 426 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 BIN3Q9NQY0 253 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 IMP3Q9NV31 184 aaKnown RBP20.21■□□□□ 0.83
SDF4-206ENST00000478938 ASB4Q9Y574 426 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 PCDHB7Q9Y5E2 793 aa20.21■□□□□ 0.83
SDF4-206ENST00000478938 NBNO60934 754 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 TMEM88Q6PEY1 159 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 IL20RBQ6UXL0 311 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 TRIM46Q7Z4K8 759 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 OR1S1Q8NH92 325 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 RNF32Q9H0A6 362 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 SNAPINO95295 136 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 ACAA1P09110 424 aaPredicted RBP20.2■□□□□ 0.82
SDF4-206ENST00000478938 ALPIP09923 528 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 KIR3DL1P43629 444 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 PUM1Q14671 1186 aaKnown RBP eCLIP20.2■□□□□ 0.828e-18■■■■■ 26.9
SDF4-206ENST00000478938 SEMA4CQ9C0C4 833 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 LATS2Q9NRM7 1088 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 SLC22A11Q9NSA0 550 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 ABCC13Q9NSE7 274 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 AKT3Q9Y243 479 aa20.2■□□□□ 0.82
SDF4-206ENST00000478938 RPL36Q9Y3U8 105 aaKnown RBP20.2■□□□□ 0.82
SDF4-206ENST00000478938 LCTP09848 1927 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 SOD1P00441 154 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 C1SP09871 688 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 DRD2P14416 443 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 SDC1P18827 310 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 AHCYP23526 432 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 VEZF1Q14119 521 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 CTSL3PQ5NE16 218 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 MCATQ8IVS2 390 aaKnown RBP20.19■□□□□ 0.82
SDF4-206ENST00000478938 ATAD1Q8NBU5 361 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 ZDHHC1Q8WTX9 485 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 UPF1Q92900 1129 aaKnown RBP eCLIP20.19■□□□□ 0.825e-9■■■■■ 31.6
SDF4-206ENST00000478938 SLC6A5Q9Y345 797 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 D6RAR5 112 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 TAPBPO15533 448 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 PAGE1O75459 146 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 RLN2P04090 185 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 PLD1Q13393 1074 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 MANEALQ5VSG8 457 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 MZT2AQ6P582 158 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 BHLHA9Q7RTU4 235 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 GPR135Q8IZ08 494 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 TCEANCQ8N8B7 351 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 OR52I1Q8NGK6 324 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 OR52N1Q8NH53 320 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 C2CD4CQ8TF44 421 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 NMNAT1Q9HAN9 279 aaPredicted RBP20.19■□□□□ 0.82
SDF4-206ENST00000478938 ACER3Q9NUN7 267 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 DTX4Q9Y2E6 619 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 NPTNQ9Y639 398 aa20.19■□□□□ 0.82
SDF4-206ENST00000478938 PKMP14618 531 aaKnown RBP20.18■□□□□ 0.82
SDF4-206ENST00000478938 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
SDF4-206ENST00000478938 HLA-FP30511 346 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 SNRPGP62308 76 aaKnown RBP20.18■□□□□ 0.82
SDF4-206ENST00000478938 SELENOWP63302 87 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 ZNF528Q3MIS6 628 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 MARC1Q5VT66 337 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 METTL7BQ6UX53 244 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 SHFQ7M4L6 423 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 SMOQ99835 787 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 CFAP97Q9P2B7 532 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 FZD4Q9ULV1 537 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
SDF4-206ENST00000478938 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 LOC730098B7Z3J9 87 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 H2AFB1P0C5Y9 115 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 H2AFB2P0C5Z0 115 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 SELLP14151 372 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 INSRRP14616 1297 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 KCNJ3P48549 501 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 RENBPP51606 427 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 BCL2L1Q07817 233 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 ZBTB6Q15916 424 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 RAB11FIP2Q7L804 512 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 LIMS2Q7Z4I7 341 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 PIANPQ8IYJ0 282 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 SCARB1Q8WTV0 552 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 OTULINQ96BN8 352 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 CACNG6Q9BXT2 260 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 CHST2Q9Y4C5 530 aa20.18■□□□□ 0.82
SDF4-206ENST00000478938 STK25O00506 426 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 FFAR2O15552 330 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 MOCS2O96007 188 aaPredicted RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 APBA3O96018 575 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 EGFP01133 1207 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 IRS1P35568 1242 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 SOX18P35713 384 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 GSTM5P46439 218 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 SP140Q13342 867 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 SBSNQ6UWP8 590 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 CELF5Q8N6W0 485 aaKnown RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 GPR20Q99678 358 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms