RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 APCDD1LQ8NCL9 501 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 EGLN2Q96KS0 407 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 ZNF681Q96N22 645 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 ASIC5Q9NY37 505 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 C5AR2Q9P296 337 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 MARCOQ9UEW3 520 aaPredicted RBP24.98■■□□□ 1.59
CCM2-211ENST00000478582 UTS2RQ9UKP6 389 aa24.98■■□□□ 1.59
CCM2-211ENST00000478582 C17orf105B2RV13 164 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 KITP10721 976 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 PRPS2P11908 318 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 PORP16435 677 aaPredicted RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 CSNK2A2P19784 350 aaPredicted RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 ASMTP46597 345 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 KCNC4Q03721 635 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 SPRED3Q2MJR0 410 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 COLEC12Q5KU26 742 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 AGAP7PQ5VUJ5 663 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 HPS6Q86YV9 775 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 SAMD14Q8IZD0 417 aaPredicted RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 BRIX1Q8TDN6 353 aaKnown RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 PPWD1Q96BP3 646 aaKnown RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 KLHL29Q96CT2 875 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 ZNF764Q96H86 408 aaPredicted RBP24.97■■□□□ 1.59
CCM2-211ENST00000478582 PPP1R36Q96LQ0 422 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 AGAP4Q96P64 663 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 SLCO1B3Q9NPD5 702 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 ZNF780BQ9Y6R6 833 aa24.97■■□□□ 1.59
CCM2-211ENST00000478582 A0A1W2PS29 197 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 SDHDO14521 159 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 ZNF195O14628 629 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 OR10H2O60403 315 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 ERAL1O75616 437 aaKnown RBP24.96■■□□□ 1.59
CCM2-211ENST00000478582 DDAH2O95865 285 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 ALPPP05187 535 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 SOX11P35716 441 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 RAPSNQ13702 412 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 CEBPEQ15744 281 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 CRB2Q5IJ48 1285 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 IL23RQ5VWK5 629 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 DGAT2L6Q6ZPD8 337 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 LARP4Q71RC2 724 aaKnown RBP eCLIP24.96■■□□□ 1.599e-6■■■■■ 29.6
CCM2-211ENST00000478582 CDC26Q8NHZ8 85 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 CNRIP1Q96F85 164 aaPredicted RBP24.96■■□□□ 1.59
CCM2-211ENST00000478582 VMP1Q96GC9 406 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 BAIAP2L1Q9UHR4 511 aa24.96■■□□□ 1.59
CCM2-211ENST00000478582 EIF3LQ9Y262 564 aaKnown RBP24.96■■□□□ 1.59
CCM2-211ENST00000478582 DYRK3O43781 588 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 TBX19O60806 448 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 ATP1B1P05026 303 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 ERVK-8P63133 956 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 OGFOD2Q6N063 350 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 IGFL2Q6UWQ7 119 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 TICAM1Q8IUC6 712 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 LIX1Q8N485 282 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 OR1N1Q8NGS0 311 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 RIT1Q92963 219 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 NCLNQ969V3 563 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 MAELQ96JY0 434 aaKnown RBP24.95■■□□□ 1.58
CCM2-211ENST00000478582 TSSK3Q96PN8 268 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 LMF1Q96S06 567 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 C1orf50Q9BV19 199 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 CLMPQ9H6B4 373 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 KCNK13Q9HB14 408 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 MIEF1Q9NQG6 463 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 SLC35C2Q9NQQ7 365 aa24.95■■□□□ 1.58
CCM2-211ENST00000478582 NOP53Q9NZM5 478 aaKnown RBP24.95■■□□□ 1.58
CCM2-211ENST00000478582 DPM1O60762 260 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 LBPP18428 481 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 CLCN2P51788 898 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 ZNF750Q32MQ0 723 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 IGFL3Q6UXB1 125 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 SLC2A12Q8TD20 617 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 ZNF721Q8TF20 911 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 MTERF3Q96E29 417 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 SENP5Q96HI0 755 aaPredicted RBP24.94■■□□□ 1.58
CCM2-211ENST00000478582 FBXL20Q96IG2 436 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 ART5Q96L15 291 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 REEP4Q9H6H4 257 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 CXorf21Q9HAI6 301 aa24.94■■□□□ 1.58
CCM2-211ENST00000478582 ZNF223Q9UK11 482 aaPredicted RBP24.94■■□□□ 1.58
CCM2-211ENST00000478582 ZIC2O95409 532 aaPredicted RBP24.93■■□□□ 1.58
CCM2-211ENST00000478582 TGDSO95455 350 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 IGKV3-11P04433 115 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 FEN1P39748 380 aaKnown RBP24.93■■□□□ 1.58
CCM2-211ENST00000478582 PDE7AQ13946 482 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 ISLR2Q6UXK2 745 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 MAVSQ7Z434 540 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 ARMC10Q8N2F6 343 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 LRRC25Q8N386 305 aaPredicted RBP24.93■■□□□ 1.58
CCM2-211ENST00000478582 KIF2BQ8N4N8 673 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 SIRT6Q8N6T7 355 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 EXOSC8Q96B26 276 aaKnown RBP24.93■■□□□ 1.58
CCM2-211ENST00000478582 OR8D2Q9GZM6 311 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 GIMAP4Q9NUV9 329 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 PTGFRNQ9P2B2 879 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 USH1CQ9Y6N9 552 aa24.93■■□□□ 1.58
CCM2-211ENST00000478582 PCSK2P16519 638 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 FOXK1P85037 733 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 MFAP5Q13361 173 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 PRSS53Q2L4Q9 553 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms