RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 A0A1W2PRS3 328 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 SMIM24O75264 130 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 FBXO45P0C2W1 286 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 SLC35E2P0CK97 266 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 PIK3R1P27986 724 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ZFP36L2P47974 494 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 SERPINB9P50453 376 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 CCNG1P51959 295 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 NUP107P57740 925 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 HERVK_113P63132 956 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ERVK-8P63133 956 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 IFT88Q13099 833 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF267Q14586 743 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 SLC25A35Q3KQZ1 300 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 CES4AQ5XG92 561 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 C18orf63Q68DL7 685 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 GALNT12Q8IXK2 581 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 L3MBTL4Q8NA19 623 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 OR5M9Q8NGP3 310 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF597Q96LX8 424 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF559Q9BR84 538 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 DOHHQ9BU89 302 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 VPS11Q9H270 941 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ACSS3Q9H6R3 686 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF703Q9H7S9 590 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 PNPLA3Q9NST1 481 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ITGB1BP2Q9UKP3 347 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 ERVK-19Q9WJR5 959 aa13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 NCOA6Q14686 2063 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-209ENST00000478349 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 CDH16O75309 829 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 KRT38O76015 456 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 IGFBP2P18065 325 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 KRT15P19012 456 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 CNTFP26441 200 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 GCKP35557 465 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 PIGAP37287 484 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 IRF9Q00978 393 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 FOXO1Q12778 655 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 MYBPHQ13203 477 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 EBPQ15125 230 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 RPS6KA2Q15349 733 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 EMC4Q5J8M3 183 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 C1orf185Q5T7R7 199 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 TMEM198Q66K66 360 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 MRM1Q6IN84 353 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 TP53INP1Q96A56 240 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 PPWD1Q96BP3 646 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 DTNBP1Q96EV8 351 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 SECISBP2Q96T21 854 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 TTYH2Q9BSA4 534 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 SORBS1Q9BX66 1292 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 ELOVL6Q9H5J4 265 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 NMRK1Q9NWW6 199 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 ADAM29Q9UKF5 820 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 CFL2Q9Y281 166 aa13.32□□□□□ -0.28
SMARCE1-209ENST00000478349 PKDREJQ9NTG1 2253 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 C2orf92A0A1B0GVN3 265 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 NKX2-6A6NCS4 301 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 STX16O14662 325 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 EEDO75530 441 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 TOXO94900 526 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 SNX4O95219 450 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 AIFM1O95831 613 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 COL6A2P12110 1019 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 BSGP35613 385 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 RIPPLY3P57055 190 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 SLC37A1P57057 533 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 TECRLQ5HYJ1 363 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 RIPPLY2Q5TAB7 128 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 PRAMEF20Q5VT98 475 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 FRG2Q64ET8 278 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 TMEM200AQ86VY9 491 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 RELL1Q8IUW5 271 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 DMRTC2Q8IXT2 367 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 CNPY4Q8N129 248 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 PTGR2Q8N8N7 351 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 WDR20Q8TBZ3 569 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 DIO2Q92813 273 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 JSRP1Q96MG2 331 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 FRG2BQ96QU4 278 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 NOL11Q9H8H0 719 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 SH2D2AQ9NP31 389 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 ACKR4Q9NPB9 350 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms