RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	LRRC75A-AS1	Q8N1F1	130 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	GRK7	Q8WTQ7	553 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	RHBDF1	Q96CC6	855 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	PTCD3	Q96EY7	689 aa	Known RBP	13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	RILP	Q96NA2	401 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	NAT9	Q9BTE0	207 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	EFCAB11	Q9BUY7	163 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	UGT2B28	Q9BY64	529 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	WWTR1	Q9GZV5	400 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	RPF2	Q9H7B2	306 aa	Known RBP	13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	PROK2	Q9HC23	129 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	PRDM7	Q9NQW5	492 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	TEX10	Q9NXF1	929 aa	Predicted RBP	13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	ASIC3	Q9UHC3	531 aa		13.01	□□□□□ -0.33
RC3H2-208	ENST00000478216	NSD1	Q96L73	2696 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	FAM95C	A0A1B0GW59	222 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216		A0A1W2PPR1	153 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TRIM64	A6NGJ6	449 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TRIM64B	A6NI03	449 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TRIM3	O75382	744 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	IL18BP	O95998	194 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	IGKV3-11	P04433	115 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	ALOX15	P16050	662 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	KRT15	P19012	456 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	HIST1H1T	P22492	207 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TLX1	P31314	330 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	SLC6A12	P48065	614 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TMED10	P49755	219 aa	Known RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	SLC12A2	P55011	1212 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	FBXW4	P57775	412 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	IRF8	Q02556	426 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	LAPTM5	Q13571	262 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	DOC2A	Q14183	400 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	NTRK2	Q16620	822 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	PDK4	Q16654	411 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	EIPR1	Q53HC9	387 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	BICRAL	Q6AI39	1079 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	VASN	Q6EMK4	673 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TCAIM	Q8N3R3	496 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	C9orf106	Q8NAJ2	232 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	TRIM58	Q8NG06	486 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	ABTB1	Q969K4	478 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	VPS39	Q96JC1	886 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	GNRHR2	Q96P88	292 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	SFXN3	Q9BWM7	321 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	EHD1	Q9H4M9	534 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	C6orf203	Q9P0P8	240 aa	Predicted RBP	13	□□□□□ -0.33
RC3H2-208	ENST00000478216	CHMP2B	Q9UQN3	213 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	C15orf41	Q9Y2V0	281 aa		13	□□□□□ -0.33
RC3H2-208	ENST00000478216	FN1	P02751	2386 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	C2orf92	A0A1B0GVN3	265 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	GNB5	O14775	395 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	CCNT2	O60583	730 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	SNX4	O95219	450 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	TBX6	O95947	436 aa	Predicted RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	TGFB1	P01137	390 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	S100B	P04271	92 aa	Predicted RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	HPN	P05981	417 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	HSPA7	P48741	367 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	DIO3	P55073	304 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	NRG3	P56975	720 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	SRY	Q05066	204 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	FOXF2	Q12947	444 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	CBLB	Q13191	982 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	SLAMF1	Q13291	335 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	DDX39B	Q13838	428 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	KBTBD12	Q3ZCT8	623 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	TMEM35A	Q53FP2	167 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	DCST1	Q5T197	706 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	DGAT2L6	Q6ZPD8	337 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	GCNT2	Q8N0V5	402 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	BBOF1	Q8ND07	529 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	ANKRD7	Q92527	254 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	RIT1	Q92963	219 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	EXT2	Q93063	718 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	ESAM	Q96AP7	390 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	INTS12	Q96CB8	462 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	WDYHV1	Q96HA8	205 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	PIP5K1A	Q99755	562 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	TM9SF2	Q99805	663 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	PELO	Q9BRX2	385 aa	Known RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	CENPK	Q9BS16	269 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	MS4A8	Q9BY19	250 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	CALHM2	Q9HA72	323 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	SNX15	Q9NRS6	342 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	JKAMP	Q9P055	326 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	TRPS1	Q9UHF7	1281 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	PHF11	Q9UIL8	331 aa		12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.99	□□□□□ -0.33
RC3H2-208	ENST00000478216	GOLGA6L10	A0A0M3HER8	536 aa		12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	ANKRD33B	A6NCL7	494 aa		12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	OR6C76	A6NM76	312 aa		12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	FPR1	P21462	350 aa		12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	BUD31	P41223	144 aa	Predicted RBP	12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	IGLV3-21	P80748	117 aa	Predicted RBP	12.98	□□□□□ -0.33
RC3H2-208	ENST00000478216	TNFRSF17	Q02223	184 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms