RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 C5orf34Q96MH7 638 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 EBPLQ9BY08 206 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 CXorf21Q9HAI6 301 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 OLAHQ9NV23 265 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 HEY2Q9UBP5 337 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 ERVK-19Q9WJR5 959 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 DLGAP4Q9Y2H0 992 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 FIS1Q9Y3D6 152 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 PTGDR2Q9Y5Y4 395 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 AZIN1O14977 448 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 ERLIN1O75477 346 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 ERAL1O75616 437 aaKnown RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 SLC25A12O75746 678 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 BPGMP07738 259 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 SP1P08047 785 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 IL3P08700 152 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 ANXA4P09525 319 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 CT62P0C5K7 136 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 CPMP14384 443 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 GALNSP34059 522 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 MAPKAPK3Q16644 382 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 EIF2S3LQ2VIR3 472 aaKnown RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 TNFAIP8L3Q5GJ75 292 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 ARL13AQ5H913 290 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 BEND6Q5SZJ8 279 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF324BQ6AW86 544 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 FAM180BQ6P0A1 224 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 GALNT18Q6P9A2 607 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 LRIG3Q6UXM1 1119 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 GALNTL5Q7Z4T8 443 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 CYP4Z2PQ8N1L4 340 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 OR5L2Q8NGL0 311 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 C16orf78Q8WTQ4 265 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 TMEM125Q96AQ2 219 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 PKNOX2Q96KN3 472 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 RASL10BQ96S79 203 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 SLX1AQ9BQ83 275 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 FAIM2Q9BWQ8 316 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 RRAGDQ9NQL2 400 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-206ENST00000478214 SIRT5Q9NXA8 310 aa14.46□□□□□ -0.09
HMGA1-206ENST00000478214 LRRK2Q5S007 2527 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ANKUB1A6NFN9 424 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 TMEM233B4DJY2 109 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 NME2P1O60361 137 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF354AO60765 605 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 RSL1D1O76021 490 aaKnown RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 OR6B1O95007 311 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 CLPSP04118 112 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 PORP16435 677 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 NT5EP21589 574 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 NME2P22392 152 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SSTR4P31391 388 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ARRB2P32121 409 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 PTGER1P34995 402 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 FEN1P39748 380 aaKnown RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SOX3P41225 446 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SLC37A1P57057 533 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 DUSP2Q05923 314 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SRSF1Q07955 248 aaKnown RBP eCLIP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 MDGA2Q7Z553 956 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 GALNT12Q8IXK2 581 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 TMEM178AQ8NBL3 297 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ST6GALNAC3Q8NDV1 305 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ASB15Q8WXK1 588 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 NR4A3Q92570 626 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 KLHL29Q96CT2 875 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 PGM2Q96G03 612 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SSU72Q9NP77 194 aaKnown RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 PSME2Q9UL46 239 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 CCL27Q9Y4X3 112 aa14.45□□□□□ -0.1
HMGA1-206ENST00000478214 POLR3HQ9Y535 204 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-206ENST00000478214 ESPL1Q14674 2120 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 WDR91A4D1P6 747 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CLEC18AA5D8T8 446 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 GOLGA6L10A6NI86 522 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 A8MVJ9 347 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 WISP2O76076 250 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CRYABP02511 175 aaKnown RBP14.44□□□□□ -0.1
HMGA1-206ENST00000478214 EDN3P14138 238 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 MST1P26927 711 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 SERPINB4P48594 390 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 MPP2Q14168 576 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 KANK2Q63ZY3 851 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 IL20RBQ6UXL0 311 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 RNF111Q6ZNA4 994 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CROCCP2Q86T23 111 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CLEC18CQ8NCF0 446 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 OR6Y1Q8NGX8 325 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 DNAJB8Q8NHS0 232 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CDC26Q8NHZ8 85 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 NUBPLQ8TB37 319 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 PRR7Q8TB68 274 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 CNRIP1Q96F85 164 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF681Q96N22 645 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 GAL3ST4Q96RP7 486 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 TUBB1Q9H4B7 451 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 EML4Q9HC35 981 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms