RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MCF2LO15068 1137 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 CASC3O15234 703 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 NUDT21O43809 227 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 HS6ST1O60243 411 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 ZG16O60844 167 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 AMBPP02760 352 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 ZNF18P17022 549 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 THOP1P52888 689 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 TNNC1P63316 161 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 PPARDQ03181 441 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 SPOCK1Q08629 439 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 SGCGQ13326 291 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 KIR2DS5Q14953 304 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 OR6B2Q6IFH4 312 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 CEACAM20Q6UY09 585 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 PAQR9Q6ZVX9 377 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 CCDC186Q7Z3E2 898 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 BIVMQ86UB2 503 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 MFN1Q8IWA4 741 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 WDTC1Q8N5D0 677 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 GSDMBQ8TAX9 411 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 ART4Q93070 314 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 AZIN2Q96A70 460 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 SNRNP40Q96DI7 357 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 GFI1Q99684 422 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 DDX50Q9BQ39 737 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 FAM213AQ9BRX8 229 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 LRRC61Q9BV99 259 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 MTMR12Q9C0I1 747 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 PLK3Q9H4B4 646 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 NMUR1Q9HB89 426 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 MCCC2Q9HCC0 563 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 DYRK4Q9NR20 520 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 TRMT1Q9NXH9 659 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 RBAKQ9NYW8 714 aaPredicted RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 RASAL2Q9UJF2 1139 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 GPR34Q9UPC5 381 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 EXOC7Q9UPT5 735 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 HBS1LQ9Y450 684 aaKnown RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 KIF3AQ9Y496 699 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 LYVE1Q9Y5Y7 322 aa4.2□□□□□ -1.74
VPS50-214ENST00000477935 COL27A1Q8IZC6 1860 aaPredicted RBP4.2□□□□□ -1.74
VPS50-214ENST00000477935 TDRD6O60522 2096 aaKnown RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 A6NCN8 305 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 ZSCAN5CA6NGD5 496 aaPredicted RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 PMS2P5A8MQ11 134 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 TMEM110-MUSTN1A8MSY1 372 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 DOK2O60496 412 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 PTP4A3O75365 173 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 HMBSP08397 361 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 PLA2G4BP0C869 781 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 FAM200BP0CF97 657 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 CTSEP14091 401 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 KLK2P20151 261 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 HTR1EP28566 365 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 ZNF131P52739 623 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 LIMK2P53671 638 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 MAP3K7CLP57077 242 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 CD81P60033 236 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 PFN3P60673 137 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 C1orf61Q13536 156 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 ZNF235Q14590 738 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 CHRNA6Q15825 494 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 WDR38Q5JTN6 314 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 PIP5KL1Q5T9C9 394 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 KIAA0930Q6ICG6 404 aaPredicted RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 ADAM5Q6NVV9 412 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 SCD5Q86SK9 330 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 CEP97Q8IW35 865 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 UNC45BQ8IWX7 931 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 CRYBG2Q8N1P7 616 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 C1orf52Q8N6N3 182 aaKnown RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 Q8N9G6 341 aaPredicted RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 DENND6BQ8NEG7 585 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 OR10V1Q8NGI7 309 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 NDRG1Q92597 394 aaKnown RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 KLK6Q92876 244 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 ZNF524Q96C55 264 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 C19orf60Q96EN9 201 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 STAMBPL1Q96FJ0 436 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 JAKMIP1Q96N16 626 aaKnown RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 AGAP3Q96P47 875 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 FOXC2Q99958 501 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 EDEM3Q9BZQ6 932 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 DNAI2Q9GZS0 605 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 DPEP3Q9H4B8 488 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 FBXO8Q9NRD0 319 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 ASF1BQ9NVP2 202 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 RCC2Q9P258 522 aaKnown RBP4.19□□□□□ -1.74
VPS50-214ENST00000477935 RPS6KL1Q9Y6S9 549 aa4.19□□□□□ -1.74
VPS50-214ENST00000477935 TP53BP1Q12888 1972 aaPredicted RBP4.18□□□□□ -1.74
VPS50-214ENST00000477935 IGHV5-10-1A0A0J9YXX1 117 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 A0A1W2PPI3 338 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 J3QR06 171 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 B4GAT1O43505 415 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 STX6O43752 255 aa4.18□□□□□ -1.74
VPS50-214ENST00000477935 KLHL41O60662 606 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms