RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 BCL2L11O43521 198 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 GPRIN2O60269 458 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 ZNF354AO60765 605 aaPredicted RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 TXNDC12O95881 172 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 FCGR3AP08637 254 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 GP9P14770 177 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 OAS2P29728 719 aaKnown RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 ELK3P41970 407 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 ARF5P84085 180 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 GFPT1Q06210 699 aaPredicted RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 ACTN3Q08043 901 aaPredicted RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 PDE7AQ13946 482 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 LASP1Q14847 261 aaKnown RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 C2orf76Q3KRA6 126 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 VWA2Q5GFL6 755 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 NHLRC3Q5JS37 347 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 SLC25A30Q5SVS4 291 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 STEAP1BQ6NZ63 245 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 CDC42EP5Q6NZY7 148 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 RFWD3Q6PCD5 774 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 RAPH1Q70E73 1250 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 FAM9BQ8IZU0 186 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 FGFRL1Q8N441 504 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 MSANTD4Q8NCY6 345 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 FBXO25Q8TCJ0 367 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 SNX21Q969T3 373 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 PNPLA2Q96AD5 504 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 COG3Q96JB2 828 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 C1orf147Q96MC9 270 aaPredicted RBP2.6□□□□□ -1.99
TARDBP-208ENST00000477447 HCFC1P51610 2035 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 CCDC69A6NI79 296 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 DDX39AO00148 427 aaKnown RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 MCF2LO15068 1137 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 LRRTM2O43300 516 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SRSF10O75494 262 aaKnown RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 REC8O95072 547 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 VENTXO95231 258 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 PNPP00491 289 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 IGHG3P01860 377 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SERPINF2P08697 491 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 MMP10P09238 476 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 CCDC159P0C7I6 412 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 FAM200BP0CF97 657 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 P4HA1P13674 534 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 HSD17B1P14061 328 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ATP6V1B1P15313 513 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 AREGP15514 252 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 PPP2R1BP30154 601 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 COPB2P35606 906 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ACADSBP45954 432 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 NSFP46459 744 aaKnown RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 PITPNBP48739 271 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 UBXN1Q04323 297 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 KLF5Q13887 457 aaPredicted RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 CRMP1Q14194 572 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 EXOSC7Q15024 291 aaKnown RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 EPC2Q52LR7 807 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 GPAT3Q53EU6 434 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 PRAMEF7Q5VXH5 474 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 NKAIN2Q5VXU1 208 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 LIPJQ5W064 366 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 WDR25Q64LD2 544 aaPredicted RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SEL1L3Q68CR1 1132 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ABRAXAS1Q6UWZ7 409 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SPAG16Q8N0X2 631 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ZNF491Q8N8L2 437 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 OR6T1Q8NGN1 323 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 RHOXF1Q8NHV9 184 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 TYMSOSQ8TAI1 123 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 RDH11Q8TC12 318 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 RAB39BQ96DA2 213 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 RAB3CQ96E17 227 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 DTD2Q96FN9 168 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 RBM18Q96H35 190 aaKnown RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SPAG8Q99932 426 aaPredicted RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 JPH2Q9BR39 696 aaPredicted RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ACAT2Q9BWD1 397 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 Q9HAA7 133 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 IL1RL2Q9HB29 575 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ELL3Q9HB65 397 aaPredicted RBP2.59□□□□□ -1.99
TARDBP-208ENST00000477447 PIGVQ9NUD9 493 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 COMMD8Q9NX08 183 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ZNF581Q9P0T4 197 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 ARMCX1Q9P291 453 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 SEC14L4Q9UDX3 406 aa2.59□□□□□ -1.99
TARDBP-208ENST00000477447 NOTCH3Q9UM47 2321 aa2.59□□□□□ -2
TARDBP-208ENST00000477447 A0A087WWV3 80 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 ZNF840PA6NDX5 716 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 ZNF487B1APH4 448 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 TLR4O00206 839 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 SH2D1BO14796 132 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 TSPAN2O60636 221 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 HSF2BPO75031 334 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 FCER2P06734 321 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 ABHD2P08910 425 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 SLC12A3P55017 1021 aa2.58□□□□□ -2
TARDBP-208ENST00000477447 RPS4XP62701 263 aaKnown RBP2.58□□□□□ -2
TARDBP-208ENST00000477447 TRA2BP62995 288 aaKnown RBP2.58□□□□□ -2
TARDBP-208ENST00000477447 CDKL1Q00532 357 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms