RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TMEM179BQ7Z7N9 219 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 NRSN1Q8IZ57 195 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 GATSQ8NAP1 163 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SPPL3Q8TCT6 385 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SNX33Q8WV41 574 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 ANKRA2Q9H9E1 313 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 IL21RQ9HBE5 538 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 STMN3Q9NZ72 180 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PTPRFP10586 1907 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RIIAD1A6NNX1 92 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 WASHC1A8K0Z3 465 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 KLK8O60259 260 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 UGDHO60701 494 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 HIST1H2ABP04908 130 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 MYL9P24844 172 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 VSX2P58304 361 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RPS21P63220 83 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SPHARQ15513 63 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 OR4C11Q6IEV9 310 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 ZC3H14Q6PJT7 736 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 WASH2PQ6VEQ5 465 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 HIST3H2AQ7L7L0 130 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 TMEFF1Q8IYR6 380 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 HIST1H2ACQ93077 130 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RFKQ969G6 155 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 CHFRQ96EP1 664 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SLC38A3Q99624 504 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 TEX10Q9NXF1 929 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 DNMT3AQ9Y6K1 912 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 A0A1W2PPK0 400 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SAGE2PA6NJ88 616 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 CCRL2O00421 344 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 NDUFB5O43674 189 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 AKT2P31751 481 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SLC3A1Q07837 685 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ST3GAL3Q11203 375 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 APOFQ13790 326 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ASB18Q6ZVZ8 466 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 LUZP2Q86TE4 346 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 IGFN1Q86VF2 1251 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 AMIGO1Q86WK6 493 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MARCH9Q86YJ5 346 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 HORMAD2Q8N7B1 307 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SETD7Q8WTS6 366 aaKnown RBP10.48□□□□□ -0.73
COL27A1-204ENST00000477421 AP3S1Q92572 193 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 UFD1Q92890 307 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 CAMK1GQ96NX5 476 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 OR2M4Q96R27 311 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 BRF2Q9HAW0 419 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 CLCA1A8K7I4 914 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 RNASET2O00584 256 aaKnown RBP10.48□□□□□ -0.73
COL27A1-204ENST00000477421 FCER2P06734 321 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 IFI30P13284 250 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SOX3P41225 446 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 P2RY2P41231 377 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MC3RP41968 323 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 RORCP51449 518 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ATP12AP54707 1039 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 EIF4EBP2Q13542 120 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MICAQ29983 383 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SMU1Q2TAY7 513 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF750Q32MQ0 723 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 C22orf42Q6IC83 251 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MZT2AQ6P582 158 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 GATAD2BQ8WXI9 593 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SLC22A18Q96BI1 424 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 TRIM43Q96BQ3 446 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-204ENST00000477421 COQ7Q99807 217 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 TBX21Q9UL17 535 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 OR51B4Q9Y5P0 310 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 H0YIV9 168 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 CLDN4O14493 209 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 AP1G1O43747 822 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SLCO2B1O94956 709 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 ACADLP28330 430 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SCN1BQ07699 218 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 UBXN2BQ14CS0 331 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 KLHL22Q53GT1 634 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 PNCKQ6P2M8 343 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 BORAQ6PGQ7 559 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 TMEM150AQ86TG1 271 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 SLC9B2Q86UD5 537 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 RAB43Q86YS6 212 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 GALNT12Q8IXK2 581 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 C9orf43Q8TAL5 461 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-204ENST00000477421 RAB7BQ96AH8 199 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 C1QTNF3Q9BXJ4 246 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 MGAT4BQ9UQ53 548 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 POLR1DQ9Y2S0 133 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 PLEKHM1Q9Y4G2 1056 aa10.48□□□□□ -0.73
COL27A1-204ENST00000477421 A8MU76 341 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PVRP15151 417 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 GJA4P35212 333 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ALDH3B2P48448 385 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 BCAP31P51572 246 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms