RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CDC73Q6P1J9 531 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 DENND1BQ6P3S1 775 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 FUT10Q6P4F1 479 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 FBXO46Q6PJ61 603 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 METTL7BQ6UX53 244 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RBM43Q6ZSC3 357 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 CPLX4Q7Z7G2 160 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SYVN1Q86TM6 617 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLC13A5Q86YT5 568 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 GID4Q8IVV7 300 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 VSTM4Q8IW00 320 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SIX6OS1Q8N1H7 587 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ELMOD1Q8N336 334 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 C17orf53Q8N3J3 647 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 MINDY1Q8N5J2 469 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ATP6V0D2Q8N8Y2 350 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ASCC1Q8N9N2 400 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 POGLUT1Q8NBL1 392 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OR6J1Q8NGC5 347 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OR52E1Q8NGJ3 308 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OR13C3Q8NGS6 347 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 OR52J3Q8NH60 311 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 LHFPL5Q8TAF8 219 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MCOLN3Q8TDD5 553 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TCP10LQ8TDR4 215 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MITD1Q8WV92 249 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TSEN15Q8WW01 171 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 RAB40AQ8WXH6 277 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ING5Q8WYH8 240 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 POMGNT1Q8WZA1 660 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLAMF9Q96A28 289 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 KIAA1143Q96AT1 154 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 CCDC51Q96ER9 411 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 DNAJC1Q96KC8 554 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 PPP1R36Q96LQ0 422 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SAMD8Q96LT4 415 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 GDAP1L1Q96MZ0 367 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 GAL3ST4Q96RP7 486 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CCNL2Q96S94 520 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 ABHD1Q96SE0 405 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CTRCQ99895 268 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 NAA11Q9BSU3 229 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 MCRIP2Q9BUT9 160 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLC25A23Q9BV35 468 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CHID1Q9BWS9 393 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLC5A7Q9GZV3 580 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 EPHX3Q9H6B9 360 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 METTL8Q9H825 291 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 RMND5AQ9H871 391 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CYP3A43Q9HB55 503 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MAGEE1Q9HCI5 957 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 VCX3AQ9NNX9 186 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MMP25Q9NPA2 562 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 LTB4R2Q9NPC1 389 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 SLC35C2Q9NQQ7 365 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TUBG2Q9NRH3 451 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.3□□□□□ -2.04
XRN1-211ENST00000477237 C19orf12Q9NSK7 152 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 FAM212BQ9NTI7 297 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 PLCXD1Q9NUJ7 323 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 DNAJC11Q9NVH1 559 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RMND1Q9NWS8 449 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 GDE1Q9NZC3 331 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 MARCH4Q9P2E8 410 aaPredicted RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 ANKMY1Q9P2S6 941 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 POLLQ9UGP5 575 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 CLEC2DQ9UHP7 191 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TSPAN16Q9UKR8 245 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 TBX20Q9UMR3 447 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 DIMT1Q9UNQ2 313 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 RUVBL2Q9Y230 463 aaKnown RBP2.3□□□□□ -2.04
XRN1-211ENST00000477237 MFHAS1Q9Y4C4 1052 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 LYVE1Q9Y5Y7 322 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 STK36Q9NRP7 1315 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 RAB3GAP2Q9H2M9 1393 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 KIF15Q9NS87 1388 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 NUP160Q12769 1436 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ZNF518AQ6AHZ1 1483 aa2.3□□□□□ -2.04
XRN1-211ENST00000477237 ABCA10Q8WWZ4 1543 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 IFT140Q96RY7 1462 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CEP162Q5TB80 1403 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 LRPPRCP42704 1394 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 A0A0J9YYE9 177 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 A0A0U1RQS6 177 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 C2orf92A0A1B0GVN3 265 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PVALEFA0A1B0GWK0 134 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 FAM230AA0A1W2PPH8 454 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GSTTP1A0A1W2PQM5 241 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ESYT2A0FGR8 921 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SMIM30A4D0T7 59 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 TMEM202A6NGA9 273 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 C12orf71A8MTZ7 269 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 A8MV72 311 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 C2orf74A8MZ97 194 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ATP6V1G2-DDX39BF2Z307 99 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 F8WDY8 70 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ZNF701M0R085 212 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 LGALS8O00214 317 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ITGB1BP1O14713 200 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms