RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 PACS2Q86VP3 889 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 TRIM42Q8IWZ5 723 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 DND1Q8IYX4 353 aaKnown RBP13.88□□□□□ -0.19
SMG5-204ENST00000476954 LILRB1Q8NHL6 650 aaPredicted RBP13.88□□□□□ -0.19
SMG5-204ENST00000476954 SPPL2AQ8TCT8 520 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 UCN3Q969E3 161 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 GTPBP3Q969Y2 492 aaKnown RBP13.88□□□□□ -0.19
SMG5-204ENST00000476954 CTHRC1Q96CG8 243 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 TMEM204Q9BSN7 226 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 KLHL4Q9C0H6 718 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 CCDC68Q9H2F9 335 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 PELI2Q9HAT8 420 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 ELOVL5Q9NYP7 299 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 LPAR3Q9UBY5 353 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 SOX13Q9UN79 622 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 LIPT1Q9Y234 373 aa13.88□□□□□ -0.19
SMG5-204ENST00000476954 C2orf72A6NCS6 295 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 EIF3FO00303 357 aaPredicted RBP13.87□□□□□ -0.19
SMG5-204ENST00000476954 PLOD2O00469 737 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 FGF17O60258 216 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 GUCA1CO95843 209 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 THBS1P07996 1170 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 ZNF16P17020 682 aaPredicted RBP13.87□□□□□ -0.19
SMG5-204ENST00000476954 SRD5A1P18405 259 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 PAMP19021 973 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 CASP3P42574 277 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
SMG5-204ENST00000476954 CASP9P55211 416 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 SERTAD2Q14140 314 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 EFTUD2Q15029 972 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMG5-204ENST00000476954 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 TIGD3Q6B0B8 471 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 ZNF610Q8N9Z0 462 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 RAB3IL1Q8TBN0 382 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 RDH11Q8TC12 318 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 NEUROG1Q92886 237 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 C1orf159Q96HA4 380 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 SERINC2Q96SA4 455 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 MAPKAP1Q9BPZ7 522 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 WWTR1Q9GZV5 400 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 FETUBQ9UGM5 382 aa13.87□□□□□ -0.19
SMG5-204ENST00000476954 MAGED1Q9Y5V3 778 aaPredicted RBP13.87□□□□□ -0.19
SMG5-204ENST00000476954 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 TP53I11O14683 189 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 SNX4O95219 450 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 CGAP01215 116 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 HIST1H2AGP0C0S8 130 aaPredicted RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 DANCRP0C864 163 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 HIST1H2ADP20671 130 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 TBXA2RP21731 343 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 IGFBP5P24593 272 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 STIP1P31948 543 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 PGGT1BP53609 377 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 EEF1A1P68104 462 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 FAPQ12884 760 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 GPS1Q13098 491 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 SP140Q13342 867 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 EEF1A1P5Q5VTE0 462 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 DESI1Q6ICB0 168 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 ABHD17CQ6PCB6 329 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 ANGPTL8Q6UXH0 198 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 C12orf54Q6X4T0 127 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 VN1R5Q7Z5H4 357 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 THOC6Q86W42 341 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 WFDC8Q8IUA0 241 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 PALM2Q8IXS6 379 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 OR2L5Q8NG80 312 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 HIST1H2AHQ96KK5 128 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 KRT12Q99456 494 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 NDNQ99608 321 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 HIST1H2AJQ99878 128 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 SLC39A3Q9BRY0 314 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 H2AFJQ9BTM1 129 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 ESRP2Q9H6T0 727 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 SERHLQ9NQF3 203 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 TRMT6Q9UJA5 497 aaKnown RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
SMG5-204ENST00000476954 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 CADP27708 2225 aa13.86□□□□□ -0.19
SMG5-204ENST00000476954 SYNDIG1LA6NDD5 238 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 HCRTR2O43614 444 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 LIASO43766 372 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 SSX4O60224 188 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 MFAP3LO75121 409 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 HAUS5O94927 633 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 PGRP06401 933 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 DPP4P27487 766 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 SLC1A2P43004 574 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 STT3AP46977 705 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 LHX2P50458 406 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 CLDN18P56856 261 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 HERVK_113P63132 956 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 ERVK-8P63133 956 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 SNX1Q13596 522 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 EBPQ15125 230 aaKnown RBP13.85□□□□□ -0.19
SMG5-204ENST00000476954 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 PAQR3Q6TCH7 311 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 P4HA3Q7Z4N8 544 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms