RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
SKA3-206ENST00000475251 GOLGA6L10A0A0M3HER8 536 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 NCF1BA6NI72 391 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 NCF1CA8MVU1 366 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 FGF17O60258 216 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SMPD2O60906 423 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 CDH16O75309 829 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 TRIM3O75382 744 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 SCELO95171 688 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 LY6G6DO95868 133 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 NCF1P14598 390 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 ALOX15P16050 662 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 CDC25BP30305 580 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 GGT5P36269 586 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SSR2P43308 183 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 FNTAP49354 379 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 CDK9P50750 372 aaKnown RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 WNT3P56703 355 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 EEF1A1P68104 462 aaKnown RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 RPS6KA2Q15349 733 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 TGFBIQ15582 683 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 TSNQ15631 228 aaKnown RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 PDK4Q16654 411 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SPRED3Q2MJR0 410 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 CDKL4Q5MAI5 379 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 EEF1A1P5Q5VTE0 462 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 VASNQ6EMK4 673 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 ST13P4Q8IZP2 240 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 PDIK1LQ8N165 341 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SNX31Q8N9S9 440 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 PBKQ96KB5 322 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SECISBP2Q96T21 854 aaKnown RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 CENPKQ9BS16 269 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SFXN3Q9BWM7 321 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 MS4A8Q9BY19 250 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 WWTR1Q9GZV5 400 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 RPF2Q9H7B2 306 aaKnown RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 POPDC3Q9HBV1 291 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 SLC17A6Q9P2U8 582 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 PHF11Q9UIL8 331 aa11.54□□□□□ -0.56
SKA3-206ENST00000475251 ZNF490Q9ULM2 529 aaPredicted RBP11.54□□□□□ -0.56
SKA3-206ENST00000475251 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 FAM95CA0A1B0GW59 222 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 SH3D21A4FU49 640 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 DNALI1O14645 258 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 OR10H2O60403 315 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 STK16O75716 305 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 CYP4B1P13584 511 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 BUD31P41223 144 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 SLC12A2P55011 1212 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 NRG3P56975 720 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 IRF8Q02556 426 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 DOC2AQ14183 400 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 POU4F3Q15319 338 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 TOMM20Q15388 145 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 TBCCQ15814 346 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 SULT1C3Q6IMI6 304 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 ZNF793Q6ZN11 406 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 CXorf67Q86X51 503 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 LRRC39Q96DD0 335 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 CFAP36Q96G28 342 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 MDFIQ99750 246 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 TM9SF2Q99805 663 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
SKA3-206ENST00000475251 RBSNQ9H1K0 784 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 UBQLN3Q9H347 655 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 NSMCE4AQ9NXX6 385 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 ASIC3Q9UHC3 531 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 C15orf41Q9Y2V0 281 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 MPDZO75970 2070 aa11.53□□□□□ -0.56
SKA3-206ENST00000475251 C2orf92A0A1B0GVN3 265 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 KIAA1324LA8MWY0 1029 aaPredicted RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 H7C1Q1 480 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 PGRMC1O00264 195 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 RTCAO00442 366 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 BANF1O75531 89 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ACSL3O95573 720 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ACTL6AO96019 429 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 BMP7P18075 431 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 FPR1P21462 350 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 PCSK6P29122 969 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 AGFG1P52594 562 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 DIO3P55073 304 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 HERVK_113P63132 956 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ERVK-8P63133 956 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 TNFRSF17Q02223 184 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 FRG1Q14331 258 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 ZNF460Q14592 562 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms