RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZNF763Q0D2J5 394 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 MGAT2Q10469 447 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PTGR1Q14914 329 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 IMPG1Q17R60 797 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 DEFB109BQ30KR1 87 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF385BQ569K4 471 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 SFT2D3Q587I9 215 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 DCAF10Q5QP82 559 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 IL23RQ5VWK5 629 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 TMEM198Q66K66 360 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 OGFOD2Q6N063 350 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 SLC48A1Q6P1K1 146 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CPEB2Q7Z5Q1 589 aaKnown RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CRLF3Q8IUI8 442 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 RIMKLAQ8IXN7 391 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 LRRC34Q8IZ02 419 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ARFGAP2Q8N6H7 521 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 KRTCAP2Q8N6L1 136 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ZSCAN1Q8NBB4 408 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ACTRT2Q8TDY3 377 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 DOK4Q8TEW6 326 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PTPMT1Q8WUK0 201 aaPredicted RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PSMF1Q92530 271 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 TANKQ92844 425 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 NACC2Q96BF6 587 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CNRIP1Q96F85 164 aaPredicted RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 THOC1Q96FV9 657 aaKnown RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 TEX37Q96LM6 180 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PPP3R2Q96LZ3 170 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 TSSK3Q96PN8 268 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CCT7Q99832 543 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 EFHD1Q9BUP0 239 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ALOXE3Q9BYJ1 711 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF700Q9H0M5 742 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PRM3Q9NNZ6 103 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 SLAMF7Q9NQ25 335 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 FGFR1OP2Q9NVK5 253 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 MS4A12Q9NXJ0 267 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ASIC5Q9NY37 505 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 TAS2R7Q9NYW3 318 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PHF11Q9UIL8 331 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF223Q9UK11 482 aaPredicted RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 VPS4AQ9UN37 437 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ERVK-11Q9UQG0 969 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 MMACHCQ9Y4U1 282 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 KCNMB2Q9Y691 235 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 FREM3P0C091 2139 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PCNX3Q9H6A9 2034 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ZGRF1Q86YA3 2104 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 EXPH5Q8NEV8 1989 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ARGFXA6NJG6 315 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 GABRR3A8MPY1 467 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 A8MUA0 341 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SLCO1B7G3V0H7 640 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 K7EM74 188 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 CLDN4O14493 209 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 AKAP10O43572 662 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SEC24DO94855 1032 aaPredicted RBP6.52□□□□□ -1.37
LIMD1-204ENST00000474665 LRATO95237 230 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 IGHEP01854 428 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 CLPSP04118 112 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 G6PDP11413 515 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 CPMP14384 443 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 DRD2P14416 443 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ACPPP15309 386 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 LBPP18428 481 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 DDCP20711 480 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 S1PR1P21453 382 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 IL12AP29459 219 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 BUD31P41223 144 aaPredicted RBP6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ZFP36L2P47974 494 aaKnown RBP6.52□□□□□ -1.37
LIMD1-204ENST00000474665 XKP51811 444 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 C21orf58P58505 322 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ERVK-8P63133 956 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 PHC1P78364 1004 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SLC13A2Q13183 592 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 DUSP8Q13202 625 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 PDE7AQ13946 482 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 CEBPEQ15744 281 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SMU1Q2TAY7 513 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 LSM12Q3MHD2 195 aaKnown RBP6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ATP6AP1LQ52LC2 224 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 OR52E8Q6IFG1 317 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ANKRD26P1Q6NSI1 321 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 BORAQ6PGQ7 559 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 NDUFAF7Q7L592 441 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 LIX1Q8N485 282 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF321PQ8N8H1 164 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 FNDC5Q8NAU1 212 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 APCDD1LQ8NCL9 501 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SIMC1Q8NDZ2 872 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 SUN3Q8TAQ9 357 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 ADAMTS18Q8TE60 1221 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 THAP4Q8WY91 577 aa6.52□□□□□ -1.37
LIMD1-204ENST00000474665 GFM2Q969S9 779 aaKnown RBP6.52□□□□□ -1.37
LIMD1-204ENST00000474665 PPWD1Q96BP3 646 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms