RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MYOCOSA0A1B0GUC4 107 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 HS6ST1O60243 411 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 CTNSO60931 367 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 OR2J2O76002 312 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 PDYNP01213 254 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 TPOP07202 933 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 PTGS2P35354 604 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 HNRNPFP52597 415 aaKnown RBP14.06□□□□□ -0.16
VARS-223ENST00000474643 CUL3Q13618 768 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 PAOXQ6QHF9 649 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 IL20RBQ6UXL0 311 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 ZNF793Q6ZN11 406 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 UBE3DQ7Z6J8 389 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 EXOC3L1Q86VI1 746 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 TICAM1Q8IUC6 712 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 C10orf107Q8IVU9 208 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 SULF2Q8IWU5 870 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 GPALPP1Q8IXQ4 340 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 C7orf57Q8NEG2 295 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 TCP10LQ8TDR4 215 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 CA5BP1Q8WTZ4 195 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 ATP6V1G3Q96LB4 118 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 CSF3RQ99062 836 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 LYRM4Q9HD34 91 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 OXSMQ9NWU1 459 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 NMRK1Q9NWW6 199 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 MEMO1Q9Y316 297 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 MYO7BQ6PIF6 2116 aa14.06□□□□□ -0.16
VARS-223ENST00000474643 A0A1B0GTL3 188 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 C17orf105B2RV13 164 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 WWP2O00308 870 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PLPP1O14494 284 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 TM9SF1O15321 606 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 TYROBPO43914 113 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 LDB3O75112 727 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 ENO1P06733 434 aaKnown RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 GRNP28799 593 aaKnown RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 TLX1P31314 330 aaPredicted RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 PTGER1P34995 402 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PTGER4P35408 488 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 DNAJB13P59910 316 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 ZNF630Q2M218 657 aaPredicted RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 C3P1Q6ZMU1 363 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PAGE2Q7Z2X7 111 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 NUDT13Q86X67 352 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 SIAH3Q8IW03 269 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 MORN4Q8NDC4 146 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PSD4Q8NDX1 1056 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 TMEM52Q8NDY8 209 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 OR5L2Q8NGL0 311 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 DGAT2Q96PD7 388 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 MAPKAP1Q9BPZ7 522 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 GSTO2Q9H4Y5 243 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 TRIM45Q9H8W5 580 aaPredicted RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 LIN28AQ9H9Z2 209 aaKnown RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 FARSBQ9NSD9 589 aaKnown RBP14.05□□□□□ -0.16
VARS-223ENST00000474643 MS4A12Q9NXJ0 267 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PSD3Q9NYI0 1048 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 SLC17A7Q9P2U7 560 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 PHF11Q9UIL8 331 aa14.05□□□□□ -0.16
VARS-223ENST00000474643 E9PLN8 166 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 MANBAO00462 879 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 TRIM13O60858 407 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 ULK1O75385 1050 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 WISP2O76076 250 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 SEMA3DO95025 777 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 CLDN14O95500 239 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 ETHE1O95571 254 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 ESRRBO95718 433 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 AGAP20933 346 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 BUD31P41223 144 aaPredicted RBP14.04□□□□□ -0.16
VARS-223ENST00000474643 ARFIP1P53367 373 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 ID2Q02363 134 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 PCLAFQ15004 111 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 HSP90B2PQ58FF3 399 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 Q6ZPB1 254 aaPredicted RBP14.04□□□□□ -0.16
VARS-223ENST00000474643 FRMD7Q6ZUT3 714 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 GPR180Q86V85 440 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 CD163Q86VB7 1156 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 PPP1R14CQ8TAE6 165 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 HBEGFQ99075 208 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 VKORC1Q9BQB6 163 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 SHCBP1LQ9BZQ2 653 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 WDR41Q9HAD4 459 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 BRF2Q9HAW0 419 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 KCNK9Q9NPC2 374 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
VARS-223ENST00000474643 LYARQ9NX58 379 aaKnown RBP14.04□□□□□ -0.16
VARS-223ENST00000474643 MYOTQ9UBF9 498 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 VTI1BQ9UEU0 232 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 ZNF835Q9Y2P0 537 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 TIMM22Q9Y584 194 aa14.04□□□□□ -0.16
VARS-223ENST00000474643 A0A1B0GTH9 108 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 H3BQF6 201 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 TGFBR3LH3BV60 316 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 CYR61O00622 381 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 ZNHIT1O43257 154 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 OR10H2O60403 315 aa14.03□□□□□ -0.16
VARS-223ENST00000474643 EEDO75530 441 aaKnown RBP14.03□□□□□ -0.16
VARS-223ENST00000474643 PDE9AO76083 593 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms