RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 CYP20A1Q6UW02 462 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 CD163Q86VB7 1156 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 SRRM1Q8IYB3 904 aaKnown RBP17.14■□□□□ 0.33
COL7A1-209ENST00000474432 RPRMLQ8N4K4 120 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 TMEM251Q8N6I4 163 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 ACBD4Q8NC06 268 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 ATP6V1E2Q96A05 226 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 FAM173AQ9BQD7 235 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 MRPL1Q9BYD6 325 aaKnown RBP17.14■□□□□ 0.33
COL7A1-209ENST00000474432 MRPL46Q9H2W6 279 aaKnown RBP17.14■□□□□ 0.33
COL7A1-209ENST00000474432 CHST11Q9NPF2 352 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 TUBA8Q9NY65 449 aaPredicted RBP17.14■□□□□ 0.33
COL7A1-209ENST00000474432 IKBKGQ9Y6K9 419 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 NINQ8N4C6 2090 aa17.14■□□□□ 0.33
COL7A1-209ENST00000474432 SMIM24O75264 130 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 IGHG3P01860 377 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ABHD2P08910 425 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
COL7A1-209ENST00000474432 CELA3AP09093 270 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 CT62P0C5K7 136 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 SLC35E2P0CK97 266 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 TSPAN8P19075 237 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 PIGAP37287 484 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 EBPQ15125 230 aaKnown RBP17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 TIFABQ6ZNK6 161 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 TAOK1Q7L7X3 1001 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 MILR1Q7Z6M3 343 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ZNF295-AS1Q8N0V1 137 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 METTL4Q8N3J2 472 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ZNF441Q8N8Z8 693 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ART5Q96L15 291 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 PELOQ9BRX2 385 aaKnown RBP17.13■□□□□ 0.33
COL7A1-209ENST00000474432 CNPPD1Q9BV87 410 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 TXLNGYQ9BZA5 131 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 WWTR1Q9GZV5 400 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 EPB41L4BQ9H329 900 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 CXorf21Q9HAI6 301 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 IL1RL2Q9HB29 575 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 SACM1LQ9NTJ5 587 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 TMEM216Q9P0N5 145 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 ADAM29Q9UKF5 820 aa17.13■□□□□ 0.33
COL7A1-209ENST00000474432 EXPH5Q8NEV8 1989 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 ADGRG4Q8IZF6 3080 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 KLK1P06870 262 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 FAM153BP0C7A2 387 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 TNFRSF8P28908 595 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 SOX18P35713 384 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 MAGEA5P43359 124 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 PLGLB1Q02325 96 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 GALNT1Q10472 559 aaPredicted RBP17.12■□□□□ 0.33
COL7A1-209ENST00000474432 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
COL7A1-209ENST00000474432 FAM153CQ494X1 144 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 NDUFAF5Q5TEU4 345 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 OR52E8Q6IFG1 317 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 RGS9BPQ6ZS82 235 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 GK5Q6ZS86 529 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 SLC15A4Q8N697 577 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 PAQR8Q8TEZ7 354 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 RIT1Q92963 219 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 SPACA9Q96E40 222 aaPredicted RBP17.12■□□□□ 0.33
COL7A1-209ENST00000474432 TRIM8Q9BZR9 551 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 CES1P1Q9UKY3 287 aa17.12■□□□□ 0.33
COL7A1-209ENST00000474432 HCFC1P51610 2035 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 FREM3P0C091 2139 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 A0A1B0GVC2 190 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 EXOC1LA0A1B0GW35 172 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 RIPK2O43353 540 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 OR10H2O60403 315 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 PDYNP01213 254 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 SNRPB2P08579 225 aaKnown RBP17.11■□□□□ 0.33
COL7A1-209ENST00000474432 FBXO45P0C2W1 286 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 SSTR4P31391 388 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 HSD17B3P37058 310 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-209ENST00000474432 FUT7Q11130 342 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 UNC50Q53HI1 259 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 SGO1Q5FBB7 561 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 C10orf62Q5T681 223 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-209ENST00000474432 RNF111Q6ZNA4 994 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 FAM47EQ6ZV65 393 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 TRILQ7L0X0 811 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 MMP21Q8N119 569 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 ZNF615Q8N8J6 731 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 MYRIPQ8NFW9 859 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 SLC22A8Q8TCC7 542 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
COL7A1-209ENST00000474432 CHCHD2Q9Y6H1 151 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-209ENST00000474432 IQANK1A0A1B0GTG1 560 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 DYRK3O43781 588 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 DLX3O60479 287 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 OR4F21O95013 312 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 P04436 131 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 S1PR1P21453 382 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 PTGER4P35408 488 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 MGAT2Q10469 447 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 IFT88Q13099 833 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 GXYLT1Q4G148 440 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms