RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 UCN3Q969E3 161 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 ARL8AQ96BM9 186 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 LUZP4Q9P127 313 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 PTGDR2Q9Y5Y4 395 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 ATMQ13315 3056 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 SPTA1P02549 2419 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 NPIPB8E9PQR5 432 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 ITM2AO43736 263 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 DDX5P17844 614 aaKnown RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 GPR143P51810 404 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 ERVK-8P63133 956 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 TLE1Q04724 770 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 SPRED3Q2MJR0 410 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 RNF111Q6ZNA4 994 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 Q6ZSR9 355 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 IKBIPQ70UQ0 350 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 OR8K3Q8NH51 312 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 RAB3IL1Q8TBN0 382 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 CPT1CQ8TCG5 803 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 EXOSC8Q96B26 276 aaKnown RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 FBXL20Q96IG2 436 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 C5orf34Q96MH7 638 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 BRINP2Q9C0B6 783 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 EPN3Q9H201 632 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 MYNNQ9NPC7 610 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 CES1P1Q9UKY3 287 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 YARS2Q9Y2Z4 477 aaKnown RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
USF1-205ENST00000473969 TNRC6AQ8NDV7 1962 aaKnown RBP12.8□□□□□ -0.36
USF1-205ENST00000473969 LSM1O15116 133 aaKnown RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 PRAMEF2O60811 474 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 PEX11AO75192 247 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 ITGA10O75578 1167 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 DDAH2O95865 285 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 CD46P15529 392 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 DDCP20711 480 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 MPIP34949 423 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 CYB561P49447 251 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 TNFSF10P50591 281 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 SSR4P51571 173 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 MLLT10P55197 1068 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 RNF4P78317 190 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 MAD2L1Q13257 205 aaPredicted RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 TUBA3CQ13748 450 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 UGT3A2Q3SY77 523 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 HLA-DQA1Q5Y7H0 255 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 MMP21Q8N119 569 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 LRRC25Q8N386 305 aaPredicted RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 ZNF781Q8N8C0 355 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 DOK4Q8TEW6 326 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 ZNF721Q8TF20 911 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 TUBGCP3Q96CW5 907 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 C19orf60Q96EN9 201 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 C11orf24Q96F05 449 aaPredicted RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 BBS4Q96RK4 519 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 MANSC1Q9H8J5 431 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 CXorf21Q9HAI6 301 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 SLC35C2Q9NQQ7 365 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 THAP1Q9NVV9 213 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 ANKRD10Q9NXR5 420 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 LRFN1Q9P244 771 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 HEY2Q9UBP5 337 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 ERVK-11Q9UQG0 969 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 CSAG2Q9Y5P2 127 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 COPG1Q9Y678 874 aaKnown RBP12.79□□□□□ -0.36
USF1-205ENST00000473969 COL6A6A6NMZ7 2263 aa12.79□□□□□ -0.36
USF1-205ENST00000473969 TLN1Q9Y490 2541 aaKnown RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 OR6C76A6NM76 312 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 A8MVJ9 347 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 J3QKU1 62 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 SORBS2O94875 1100 aaKnown RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 NTSP30990 170 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ARRB2P32121 409 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 CD96P40200 585 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ASMTP46597 345 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 HLCSP50747 726 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 BST1Q10588 318 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 KIAA0040Q15053 153 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 OR1C1Q15619 314 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 INPP5JQ15735 1006 aaPredicted RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 ZNF750Q32MQ0 723 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 ZNF766Q5HY98 468 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 FAM71E1Q6IPT2 247 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 DGAT2L6Q6ZPD8 337 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ATCAYQ86WG3 371 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms