RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GNPDA2Q8TDQ7 276 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SLC5A11Q8WWX8 675 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 BHMTQ93088 406 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 NEDD4LQ96PU5 975 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 GDF15Q99988 308 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 BARHL1Q9BZE3 327 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PIGUQ9H490 435 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 RANGRFQ9HD47 186 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 TOR4AQ9NXH8 423 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CALML5Q9NZT1 146 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 B4GALT6Q9UBX8 382 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 REV1Q9UBZ9 1251 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TEKT2Q9UIF3 430 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ACAD8Q9UKU7 415 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 NDUFB5O43674 189 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF4O60810 478 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 EFCAB14O75071 495 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ABLIM3O94929 683 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CELF2O95319 508 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 OLFM2O95897 454 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CCNYL3P0C7X3 344 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CD53P19397 219 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ALAS2P22557 587 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 HTR2BP41595 481 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 KHKP50053 298 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 P2RX3P56373 397 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TAS2R50P59544 299 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CD83Q01151 205 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PTPRRQ15256 657 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SNAPC1Q16533 368 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TATDN3Q17R31 274 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SOWAHCQ53LP3 525 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 ESCO2Q56NI9 601 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 COX20Q5RI15 118 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF9Q5VWM5 478 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CDC73Q6P1J9 531 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 NXPE4Q6UWF7 544 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 BAIAP2L2Q6UXY1 529 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 APCDD1Q8J025 514 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 KLHL36Q8N4N3 616 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 OR4K1Q8NGD4 311 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 CXorf40AQ8TE69 158 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 DEDD2Q8WXF8 326 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 LINC01599Q8WXQ3 324 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 C7orf50Q9BRJ6 194 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 ZDHHC6Q9H6R6 413 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 MRPL17Q9NRX2 175 aaKnown RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 ACSS1Q9NUB1 689 aaPredicted RBP5.82□□□□□ -1.48
HERC4-209ENST00000473533 TMEM184CQ9NVA4 438 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 TVP23BQ9NYZ1 205 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 EMC3Q9P0I2 261 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 ADAM29Q9UKF5 820 aa5.82□□□□□ -1.48
HERC4-209ENST00000473533 SLC5A10A0PJK1 596 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 B8ZZF3 427 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 K7ERQ8 282 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 YY2O15391 372 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 ALDH1A1P00352 501 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PSKH1P11801 424 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 DDCP20711 480 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 IMPA1P29218 277 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 GPC1P35052 558 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 MANFP55145 182 aaKnown RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 SLAMF1Q13291 335 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 IL18Q14116 193 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 MLC1Q15049 377 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 ENTPD8Q5MY95 495 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 SNAP47Q5SQN1 464 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 SIGIRRQ6IA17 410 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 CCSAPQ6IQ19 270 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 SLC27A4Q6P1M0 643 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PGBD2Q6P3X8 592 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PRSS55Q6UWB4 352 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 RSPO2Q6UXX9 243 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 DPY19L3Q6ZPD9 716 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 RRM2BQ7LG56 351 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 LRRC56Q8IYG6 542 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 RAB42Q8N4Z0 105 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 YIPF7Q8N8F6 280 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 OR52I1Q8NGK6 324 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 OR9A1PQ8NGU1 263 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 OR52N1Q8NH53 320 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PKP4Q99569 1192 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 MARVELD1Q9BSK0 173 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 SGPP1Q9BX95 441 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 MMP28Q9H239 520 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PELI2Q9HAT8 420 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 SPG21Q9NZD8 308 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 H2AFY2Q9P0M6 372 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 PLEKHB1Q9UF11 243 aaPredicted RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 NUP50Q9UKX7 468 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 CLCA2Q9UQC9 943 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 PLXNA4Q9HCM2 1894 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 TRAV19A0A0A6YYK7 116 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 ANKDD1BA6NHY2 528 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 CPNE3O75131 537 aaKnown RBP5.81□□□□□ -1.48
HERC4-209ENST00000473533 RFPL3O75679 317 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 FGBP02675 491 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 HMGN1P05114 100 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 BCHEP06276 602 aa5.81□□□□□ -1.48
HERC4-209ENST00000473533 TNFRSF1BP20333 461 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms