RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 A8MUI8 341 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 POLR3GO15318 223 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 ZNF354AO60765 605 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 CRCPO75575 148 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 RSL1D1O76021 490 aaKnown RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 HSPA4LO95757 839 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 CHEK2O96017 543 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 IL3P08700 152 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 CT62P0C5K7 136 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 BUD31P41223 144 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 SLC1A6P48664 564 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 MGAT2Q10469 447 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 MFAP5Q13361 173 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 TERF2Q15554 542 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 EXT1Q16394 746 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 RFTN2Q52LD8 501 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 SPIN4Q56A73 249 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 CRB2Q5IJ48 1285 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 SPDYAQ5MJ70 313 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 SLC6A19Q695T7 634 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 JMJD6Q6NYC1 403 aaPredicted RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 SLC48A1Q6P1K1 146 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 ISLR2Q6UXK2 745 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 SIMC1Q8NDZ2 872 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 B3GNT7Q8NFL0 401 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 ZNF721Q8TF20 911 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 EGLN2Q96KS0 407 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 C7orf26Q96N11 449 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 ZNF681Q96N22 645 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 SIKE1Q9BRV8 207 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
TPM3-216ENST00000473036 KCNK13Q9HB14 408 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 PNPOQ9NVS9 261 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 NMRK1Q9NWW6 199 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 HAO1Q9UJM8 370 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 SPACA6W5XKT8 324 aa12.21□□□□□ -0.45
TPM3-216ENST00000473036 LRBAP50851 2863 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 C17orf105B2RV13 164 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 SNNO75324 88 aaPredicted RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 SORBS2O94875 1100 aaKnown RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 WDPCPO95876 746 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 IFNA16P05015 189 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 ICAM2P13598 275 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 TRA2BP62995 288 aaKnown RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 ACSM2AQ08AH3 577 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 SERTAD2Q14140 314 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 PRR30Q53SZ7 412 aaPredicted RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 ACSM2BQ68CK6 577 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 OR52E8Q6IFG1 317 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 FAM71E1Q6IPT2 247 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 NOXRED1Q6NXP6 359 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 Q6ZS92 163 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 ZNF227Q86WZ6 799 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 WDR75Q8IWA0 830 aaKnown RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 ARMC10Q8N2F6 343 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 OR1N1Q8NGS0 311 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 SLC2A12Q8TD20 617 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 NUDT8Q8WV74 236 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 CNRIP1Q96F85 164 aaPredicted RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 LMF1Q96S06 567 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
TPM3-216ENST00000473036 LRTM1Q9HBL6 345 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 ADAM21Q9UKJ8 722 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 RAP2CQ9Y3L5 183 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
TPM3-216ENST00000473036 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 ATP6AP2A0A1C7CYW4 349 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 C1orf226A1L170 272 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 SLC28A1O00337 649 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 SEC22BO75396 215 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 ATP6AP2O75787 350 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 TGDSO95455 350 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 ANXA4P09525 319 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 PCSK2P16519 638 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 S1PR1P21453 382 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 FEN1P39748 380 aaKnown RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 XKP51811 444 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 MLLT10P55197 1068 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 DUSP8Q13202 625 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 IMPG1Q17R60 797 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 ACER2Q5QJU3 275 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 DDIASQ8IXT1 998 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 ST13P4Q8IZP2 240 aaPredicted RBP12.19□□□□□ -0.46
TPM3-216ENST00000473036 TMEM132CQ8N3T6 1108 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 OR4K14Q8NGD5 310 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 OR14A16Q8NHC5 309 aa12.19□□□□□ -0.46
TPM3-216ENST00000473036 THAP3Q8WTV1 239 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms