RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 WDYHV1Q96HA8 205 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 RUNDC3BQ96NL0 473 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 MCMBPQ9BTE3 642 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 UBQLN3Q9H347 655 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 SLC6A5Q9Y345 797 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 OARD1Q9Y530 152 aa8.53□□□□□ -1.04
VCL-204ENST00000472585 MED12Q93074 2177 aa8.52□□□□□ -1.04
VCL-204ENST00000472585 NINQ8N4C6 2090 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 A0A1W2PS29 197 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ANKDD1BA6NHY2 528 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 EEF1E1-BLOC1S5C9J1V9 151 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 SAP18O00422 153 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 LCE2BO14633 110 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 EEF1E1O43324 174 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 CNOT4O95628 575 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 FPR1P21462 350 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 GGT5P36269 586 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ELK3P41970 407 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 STT3AP46977 705 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 KCNJ2P63252 427 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 SF3B4Q15427 424 aaKnown RBP eCLIP8.52□□□□□ -1.054e-8■■■□□ 15.9
VCL-204ENST00000472585 EIPR1Q53HC9 387 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 NSUN5P2Q63ZY6 315 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 C18orf63Q68DL7 685 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 FAM45BPQ6NSW5 357 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 TRIM40Q6P9F5 258 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ZNF662Q6ZS27 426 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 LIX1Q8N485 282 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 C9orf106Q8NAJ2 232 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 FAM45AQ8TCE6 357 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ZNF473Q8WTR7 871 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 SLC44A1Q8WWI5 657 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 SMPDL3BQ92485 455 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 ANKRD7Q92527 254 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 WDR34Q96EX3 536 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 JSRP1Q96MG2 331 aaPredicted RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 DACH2Q96NX9 599 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 GNRHR2Q96P88 292 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 CCL19Q99731 98 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 EGFL8Q99944 293 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 MS4A8Q9BY19 250 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 PRDM14Q9GZV8 571 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 LYRM4Q9HD34 91 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 QPCTLQ9NXS2 382 aa8.52□□□□□ -1.05
VCL-204ENST00000472585 MRPS33Q9Y291 106 aaKnown RBP8.52□□□□□ -1.05
VCL-204ENST00000472585 HEATR5AQ86XA9 2040 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 C15orf38-AP3S2A0A0A6YYH1 394 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 MBD3L4A6NDZ8 208 aaPredicted RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 MBD3L3A6NE82 208 aaPredicted RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 MBD3L5A6NJ08 208 aaPredicted RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 TP73O15350 636 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 SCELO95171 688 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TTC4O95801 387 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TGFB1P01137 390 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 AVPP01185 164 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 HPNP05981 417 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 HSPA7P48741 367 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 HNMTP50135 292 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 CDK9P50750 372 aaKnown RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 NAGLUP54802 743 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 SLC37A1P57057 533 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 FBXW4P57775 412 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 SERTAD2Q14140 314 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 E2F2Q14209 437 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TGFBIQ15582 683 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 OR4D1Q15615 310 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 NTRK2Q16620 822 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 STEAP4Q687X5 459 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 LACC1Q8IV20 430 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 KRT78Q8N1N4 520 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 BBOF1Q8ND07 529 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TTLQ8NG68 377 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 MBD3L2Q8NHZ7 208 aaPredicted RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 HPS1Q92902 700 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 ISL2Q96A47 359 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 HSPBAP1Q96EW2 488 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 CFAP36Q96G28 342 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 FBXL20Q96IG2 436 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TRIB1Q96RU8 372 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 G6PC3Q9BUM1 346 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 UGT2B28Q9BY64 529 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 EHD1Q9H4M9 534 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 PPANQ9NQ55 473 aaKnown RBP8.51□□□□□ -1.05
VCL-204ENST00000472585 SMYD2Q9NRG4 433 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 CNIH4Q9P003 139 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 CHMP2BQ9UQN3 213 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 WIF1Q9Y5W5 379 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 TEX264Q9Y6I9 313 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 DOCK7Q96N67 2140 aa8.51□□□□□ -1.05
VCL-204ENST00000472585 FAM95CA0A1B0GW59 222 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ANKRD33BA6NCL7 494 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 CD8B2A6NJW9 211 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms