RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CCDC175P0C221 793 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 CRYGSP22914 178 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 CPOXP36551 454 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 MAGEA3P43357 314 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 MASP1P48740 699 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 PCYT1AP49585 367 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 NAGLUP54802 743 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 EEF1A1P68104 462 aaKnown RBP17.32■□□□□ 0.36
SORT1-203ENST00000471996 FAM27E3Q08E93 113 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 GAB1Q13480 694 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 CAPRIN1Q14444 709 aaKnown RBP17.32■□□□□ 0.36
SORT1-203ENST00000471996 TOMM20Q15388 145 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 EEF1A1P5Q5VTE0 462 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ADNP2Q6IQ32 1131 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ZNF793Q6ZN11 406 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ADGRE4PQ86SQ3 457 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 TAGAPQ8N103 731 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 IGFBPL1Q8WX77 278 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 SIGLEC10Q96LC7 697 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 F2RL3Q96RI0 385 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 UCN2Q96RP3 112 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ANGPTL4Q9BY76 406 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ROGDIQ9GZN7 287 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 WWTR1Q9GZV5 400 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 ACBD3Q9H3P7 528 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 KLHL28Q9NXS3 571 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 FETUBQ9UGM5 382 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 PACSIN3Q9UKS6 424 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 SPACA6W5XKT8 324 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 SONP18583 2426 aaKnown RBP17.32■□□□□ 0.36
SORT1-203ENST00000471996 IQANK1A0A1B0GTG1 560 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 CAPN14A8MX76 684 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 WDR47O94967 919 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 CPN1P15169 458 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 GDF5P43026 501 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 HNMTP50135 292 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 CDKL1Q00532 357 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 BIKQ13323 160 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 TNK1Q13470 666 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 EBPQ15125 230 aaKnown RBP17.31■□□□□ 0.36
SORT1-203ENST00000471996 RPS6KA2Q15349 733 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 GCNT2Q8N0V5 402 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 RNF10Q8N5U6 811 aaKnown RBP17.31■□□□□ 0.36
SORT1-203ENST00000471996 MEIOBQ8N635 442 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 ACOT4Q8N9L9 421 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 SPPL2AQ8TCT8 520 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 WNT2BQ93097 391 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 DOCK7Q96N67 2140 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 HS3ST6Q96QI5 342 aa17.31■□□□□ 0.36
SORT1-203ENST00000471996 ANK2Q01484 3957 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 NINQ8N4C6 2090 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 MSTNO14793 375 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 SNPHO15079 494 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 SOX30O94993 753 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 ATP5A1P25705 553 aaKnown RBP17.3■□□□□ 0.36
SORT1-203ENST00000471996 FBXW4P57775 412 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 HERVK_113P63132 956 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 ERVK-8P63133 956 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 PLIN5Q00G26 463 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 TMEM64Q6YI46 380 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 PLEKHM3Q6ZWE6 761 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 UBE3DQ7Z6J8 389 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 BBOF1Q8ND07 529 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 FAM83FQ8NEG4 500 aaPredicted RBP17.3■□□□□ 0.36
SORT1-203ENST00000471996 MAIP1Q8WWC4 291 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 EGFL8Q99944 293 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 MED18Q9BUE0 208 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 ERVK-6Q9BXR3 956 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 ZNF701Q9NV72 531 aaPredicted RBP17.3■□□□□ 0.36
SORT1-203ENST00000471996 ZNF490Q9ULM2 529 aaPredicted RBP17.3■□□□□ 0.36
SORT1-203ENST00000471996 ERVK-19Q9WJR5 959 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 VWA7Q9Y334 891 aa17.3■□□□□ 0.36
SORT1-203ENST00000471996 FREM3P0C091 2139 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CDC7O00311 574 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 TNFSF13O75888 250 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 FGGP02679 453 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CPN2P22792 545 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 LOXP28300 417 aaPredicted RBP17.29■□□□□ 0.36
SORT1-203ENST00000471996 PTPN6P29350 595 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CASP3P42574 277 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 SLC6A12P48065 614 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CRYMQ14894 314 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 C18orf21Q32NC0 220 aaPredicted RBP17.29■□□□□ 0.36
SORT1-203ENST00000471996 PLXDC2Q6UX71 529 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 YRDCQ86U90 279 aaKnown RBP17.29■□□□□ 0.36
SORT1-203ENST00000471996 HIPK1Q86Z02 1210 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CNTN4Q8IWV2 1026 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
SORT1-203ENST00000471996 DOK4Q8TEW6 326 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 TMEM41AQ96HV5 264 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 MARK4Q96L34 752 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 PIGQQ9BRB3 760 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 DESI2Q9BSY9 194 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 CAPS2Q9BXY5 557 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 EHD1Q9H4M9 534 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 TEX10Q9NXF1 929 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms