RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CFAP36Q96G28 342 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 RBM18Q96H35 190 aaKnown RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF597Q96LX8 424 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 AICDAQ9GZX7 198 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 DMRT3Q9NQL9 472 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 SPRR3Q9UBC9 169 aa8.4□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF629Q9UEG4 869 aaPredicted RBP8.4□□□□□ -1.06
CPSF4-211ENST00000471455 IQANK1A0A1B0GTG1 560 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 J3QW42 95 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TP53I11O14683 189 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 LDB3O75112 727 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 STK16O75716 305 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 EPPINO95925 133 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 HIST1H1TP22492 207 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 CPN2P22792 545 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TACR1P25103 407 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 GDF1P27539 372 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ADSLP30566 484 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TLX1P31314 330 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TIMP3P35625 211 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 PIGAP37287 484 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ELK3P41970 407 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 GDF5P43026 501 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SSR2P43308 183 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 EIF1AXP47813 144 aaKnown RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TMED10P49755 219 aaKnown RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ADAM8P78325 824 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 MGAT5Q09328 741 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 MORF4L2Q15014 288 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TGFBIQ15582 683 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 DEFB113Q30KQ7 82 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF791Q3KP31 576 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ACSF3Q4G176 576 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TMEM198Q66K66 360 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 STEAP4Q687X5 459 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SULT1C3Q6IMI6 304 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TAOK1Q7L7X3 1001 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ZC3HC1Q86WB0 502 aaKnown RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ACOT4Q8N9L9 421 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 FAM13CQ8NE31 585 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ACTRT1Q8TDG2 376 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF721Q8TF20 911 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 WDR34Q96EX3 536 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 TSPAN17Q96FV3 270 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 FBXL20Q96IG2 436 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 MS4A14Q96JA4 679 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 JSRP1Q96MG2 331 aaPredicted RBP8.39□□□□□ -1.07
CPSF4-211ENST00000471455 GAL3ST4Q96RP7 486 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SH3GL2Q99962 352 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 YIPF4Q9BSR8 244 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 DOHHQ9BU89 302 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 CNPPD1Q9BV87 410 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 DERL2Q9GZP9 239 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SH2D2AQ9NP31 389 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 SLC17A6Q9P2U8 582 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 PHF11Q9UIL8 331 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 IKZF3Q9UKT9 509 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 CBLCQ9ULV8 474 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 CHMP2BQ9UQN3 213 aa8.39□□□□□ -1.07
CPSF4-211ENST00000471455 NCF1BA6NI72 391 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 OR6C76A6NM76 312 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 NCF1CA8MVU1 366 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 CES2O00748 559 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 OR10H2O60403 315 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 CDH16O75309 829 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 BANF1O75531 89 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SCELO95171 688 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SNX4O95219 450 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ETHE1O95571 254 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 NCF1P14598 390 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ENDOUP21128 410 aaKnown RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 OPRM1P35372 400 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 GGT5P36269 586 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 BUD31P41223 144 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 NR0B1P51843 470 aaKnown RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RAP1GDS1P52306 607 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ARL4CP56559 192 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 TAS2R39P59534 338 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ATP6V0D1P61421 351 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 PHEXP78562 749 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 IGLV3-21P80748 117 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 POU4F1Q01851 419 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 IRF8Q02556 426 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 TBCCQ15814 346 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 PRAMEF20Q5VT98 475 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 TRMT10BQ6PF06 316 aaKnown RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SCIMPQ6UWF3 145 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RNF111Q6ZNA4 994 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SYDE1Q6ZW31 735 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 LRRC70Q7Z2Q7 622 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 GPSM1Q86YR5 675 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 C9orf40Q8IXQ3 194 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF321PQ8N8H1 164 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RELL2Q8NC24 303 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 BBOF1Q8ND07 529 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms