RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 ANGPTL3Q9Y5C1 460 aa11.66□□□□□ -0.54
GAPVD1-214ENST00000469528 IKBKGQ9Y6K9 419 aa11.66□□□□□ -0.54
GAPVD1-214ENST00000469528 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 C2orf92A0A1B0GVN3 265 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 SYCE1LA8MT33 242 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 K7EPI3 171 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 RTCAO00442 366 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 ZNF354AO60765 605 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 PRAMEF4O60810 478 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 GSTA2P09210 222 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 RFPL3SP0C7P2 107 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 OPRM1P35372 400 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 GP5P40197 560 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 RAB10P61026 200 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 DUSP8Q13202 625 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 KEAP1Q14145 624 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 NTRK2Q16620 822 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 SPRED3Q2MJR0 410 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 PRAMEF20Q5VT98 475 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 PRAMEF9Q5VWM5 478 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 LIPJQ5W064 366 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CYP20A1Q6UW02 462 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 C3orf62Q6ZUJ4 267 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 RAPH1Q70E73 1250 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 TBC1D1Q86TI0 1168 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 C9orf40Q8IXQ3 194 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 DIO2Q92813 273 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 ZNF597Q96LX8 424 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 GAL3ST4Q96RP7 486 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 GPR22Q99680 433 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 TIMP4Q99727 224 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 MCMBPQ9BTE3 642 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CALHM2Q9HA72 323 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 SNX15Q9NRS6 342 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 LYARQ9NX58 379 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 NUDT4Q9NZJ9 180 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 RNF14Q9UBS8 474 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 TSC22D4Q9Y3Q8 395 aa11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 CHCHD2Q9Y6H1 151 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-214ENST00000469528 ABCA4P78363 2273 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SAP18O00422 153 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 RAF1P04049 648 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SLC35E2BP0CK96 405 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SLC35E2P0CK97 266 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 CD22P20273 847 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 CRABP2P29373 138 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 MASP1P48740 699 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 TRPC1P48995 793 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SLC37A1P57057 533 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 HERVK_113P63132 956 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 ERVK-8P63133 956 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 EEF1A1P68104 462 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 TNFRSF17Q02223 184 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 OR4D1Q15615 310 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 FBXO48Q5FWF7 155 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 C6orf163Q5TEZ5 329 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 EEF1A1P5Q5VTE0 462 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 ADNP2Q6IQ32 1131 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 GRHL2Q6ISB3 625 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 DTNBP1Q96EV8 351 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 RBBP8Q99708 897 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 WDR83Q9BRX9 315 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 ERVK-6Q9BXR3 956 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 TRIM31Q9BZY9 425 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 WWTR1Q9GZV5 400 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 OR51B5Q9H339 312 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 ERVK-19Q9WJR5 959 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 PLEKHA6Q9Y2H5 1048 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 NPFFR2Q9Y5X5 522 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 SAR1BQ9Y6B6 198 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
GAPVD1-214ENST00000469528 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 UGDHO60701 494 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 SH3BGRLO75368 114 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 TRIM3O75382 744 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 ACSL3O95573 720 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 IL18BPO95998 194 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 HPNP05981 417 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 LTA4HP09960 611 aaKnown RBP11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 DRD2P14416 443 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 KRT15P19012 456 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 CTSSP25774 331 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 PIK3R1P27986 724 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 SORDQ00796 357 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 CUL3Q13618 768 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 DDX39BQ13838 428 aaKnown RBP11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 RCAN2Q14206 197 aa11.63□□□□□ -0.55
GAPVD1-214ENST00000469528 SETDB1Q15047 1291 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms