RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FHP07954 510 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 ARAFP10398 606 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 PORP16435 677 aaPredicted RBP17.85■□□□□ 0.45
SMC4-209ENST00000468653 PRR5P85299 388 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 FOLH1Q04609 750 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 LTB4RQ15722 352 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 GPR19Q15760 415 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 NKG7Q16617 165 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 SLC30A8Q8IWU4 369 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 D2HGDHQ8N465 521 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 OR56A1Q8NGH5 318 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 OR10Q1Q8NGQ4 319 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 NAT6Q93015 286 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 TBC1D20Q96BZ9 403 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 ELP4Q96EB1 424 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 SLC41A2Q96JW4 573 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 ADPRHL2Q9NX46 363 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 HCN3Q9P1Z3 774 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 ANGPT4Q9Y264 503 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 UNC13CQ8NB66 2214 aa17.85■□□□□ 0.45
SMC4-209ENST00000468653 FITM1A5D6W6 292 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 CASC3O15234 703 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 LDB3O75112 727 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 NSA2O95478 260 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 RNH1P13489 461 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 CPMP14384 443 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 MC3RP41968 323 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 AVPR1BP47901 424 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 ANXA11P50995 505 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 AQP4P55087 323 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 ID2Q02363 134 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 EEF1A2Q05639 463 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 TMEM71Q6P5X7 295 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 EIF3MQ7L2H7 374 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 TMEM52Q8NDY8 209 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 KAT2AQ92830 837 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 CIB1Q99828 191 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 BDH2Q9BUT1 245 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 TRPC4Q9UBN4 977 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 ATXN7L1Q9ULK2 861 aaPredicted RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 C5orf58C9J3I9 102 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 CLOCKO15516 846 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 PCDHGA12O60330 932 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 DEAF1O75398 565 aaPredicted RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 GPR75O95800 540 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 ACADSP16219 412 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 MATN1P21941 496 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 MPLP40238 635 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 EMP3P54852 163 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 CCL7P80098 99 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 FAM214AQ32MH5 1076 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 INAVAQ3KP66 663 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 FKBP9P1Q75LS8 142 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 CBLL1Q75N03 491 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 SHISA5Q8N114 240 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 GALNT4Q8N4A0 578 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 NUP43Q8NFH3 380 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 RAB8BQ92930 207 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 MMABQ96EY8 250 aaPredicted RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 OR51I1Q9H343 314 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 SMOC1Q9H4F8 434 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 SYNDIG1Q9H7V2 258 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 A4GALTQ9NPC4 353 aa17.84■□□□□ 0.45
SMC4-209ENST00000468653 THUMPD1Q9NXG2 353 aaKnown RBP17.84■□□□□ 0.45
SMC4-209ENST00000468653 RP1P56715 2156 aa17.83■□□□□ 0.45
SMC4-209ENST00000468653 TMEM247A6NEH6 219 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 SAC3D1A6NKF1 404 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 FGF17O60258 216 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 RPLP0P05388 317 aaKnown RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 NELFEP18615 380 aaKnown RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 KHKP50053 298 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 DAB2P98082 770 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 SQSTM1Q13501 440 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 CYBRD1Q53TN4 286 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 REEP3Q6NUK4 255 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 SLC44A2Q8IWA5 706 aaPredicted RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 NAF1Q96HR8 494 aaKnown RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 TPD52L3Q96J77 140 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 VPS50Q96JG6 964 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 ASPSCR1Q9BZE9 553 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 ARRDC1-AS1Q9H2J1 176 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 ZNF768Q9H5H4 540 aaKnown RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 COQ10BQ9H8M1 238 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 CLK4Q9HAZ1 481 aaKnown RBP17.83■□□□□ 0.44
SMC4-209ENST00000468653 LAMA1P25391 3075 aa17.83■□□□□ 0.44
SMC4-209ENST00000468653 HMGN4O00479 90 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 TOX3O15405 576 aaPredicted RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 SUV39H1O43463 412 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 GCM2O75603 506 aaPredicted RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 CPNE6O95741 557 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 IFNA14P01570 189 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 BCHEP06276 602 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 OR12D1P0DN82 309 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 FOLR1P15328 257 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 CKMT2P17540 419 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 ATP6V1C1P21283 382 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 MAGEA8P43361 318 aa17.82■□□□□ 0.44
SMC4-209ENST00000468653 MAT1AQ00266 395 aaKnown RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 LASP1Q14847 261 aaKnown RBP17.82■□□□□ 0.44
SMC4-209ENST00000468653 ZBTB49Q6ZSB9 765 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms