RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 FRMD6Q96NE9 622 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 DGAT2Q96PD7 388 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 SHCBP1LQ9BZQ2 653 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 LIN28AQ9H9Z2 209 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 VPS29Q9UBQ0 182 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 MID2Q9UJV3 735 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 ADAM29Q9UKF5 820 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 NCOA6Q14686 2063 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 PCNX1Q96RV3 2341 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 CCDC151A5D8V7 595 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 UBFD1O14562 309 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 PGRMC2O15173 223 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 ASNA1O43681 348 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 CRCPO75575 148 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SLC25A12O75746 678 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 ZFAND5O76080 213 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 GPR75O95800 540 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 AIFM1O95831 613 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 TUBBP07437 444 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 NR2F6P10588 404 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 COX7A2P14406 83 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 COX6B1P14854 86 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SERPINB3P29508 390 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 HTR6P50406 440 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 HLCSP50747 726 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 MAPK12P53778 367 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 MLF1P58340 268 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 NAA20P61599 178 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 PMP22Q01453 160 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SRSF11Q05519 484 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 LIPMQ5VYY2 423 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 GALNTL5Q7Z4T8 443 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SIAH3Q8IW03 269 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 C1orf52Q8N6N3 182 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF321PQ8N8H1 164 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 AGAP11Q8TF27 550 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 PHF10Q8WUB8 498 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 TMEM109Q9BVC6 243 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 KLHL1Q9NR64 748 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 SLC17A7Q9P2U7 560 aa13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-211ENST00000467553 KLRC4-KLRK1H3BQV0 150 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 DYRK3O43781 588 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 NME2P1O60361 137 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 OR10H2O60403 315 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 HSD3B1P14060 373 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 ALOX15P16050 662 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 CREB1P16220 341 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 NME2P22392 152 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 HSD3B2P26439 372 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 PIK3R1P27986 724 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 STT3AP46977 705 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 FOXA1P55317 472 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 IGLV3-21P80748 117 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 GALNT1Q10472 559 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 TBL3Q12788 808 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 CSTF3Q12996 717 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 PCLAFQ15004 111 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 C3AR1Q16581 482 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 MAPKAPK3Q16644 382 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 NDUFAF5Q5TEU4 345 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF468Q5VIY5 522 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 HSDL2Q6YN16 418 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 DGAT2L6Q6ZPD8 337 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 TMEM156Q8N614 296 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 GBP7Q8N8V2 638 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 TCP10LQ8TDR4 215 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 CHTF18Q8WVB6 975 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 SENP5Q96HI0 755 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 HES7Q9BYE0 225 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 CENPHQ9H3R5 247 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 PPIEQ9UNP9 301 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 MEMO1Q9Y316 297 aa13.05□□□□□ -0.32
CCHCR1-211ENST00000467553 TACC2O95359 2948 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 DCHS2Q6V1P9 2916 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 E9PLN8 166 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 PRRG2O14669 202 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 RGS16O15492 202 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 TRIM13O60858 407 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ITGA10O75578 1167 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 CLDN14O95500 239 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 PRF1P14222 555 aa13.04□□□□□ -0.32
CCHCR1-211ENST00000467553 ZNF24P17028 368 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms