RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ZNF582Q96NG8 517 aaPredicted RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 OR4K3Q96R72 315 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 PRR14Q9BWN1 585 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 SPIN1Q9Y657 262 aaPredicted RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 PCM1Q15154 2024 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 PRODHO43272 600 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 SH3BP5O60239 455 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF821O75541 412 aaPredicted RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 SLC22A5O76082 557 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 HMGA1P17096 107 aaKnown RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 GSTM3P21266 225 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 APEX1P27695 318 aaKnown RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 TGM4P49221 684 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 PER3P56645 1201 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 UBE3AQ05086 875 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 MXD1Q05195 221 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 COL28A1Q2UY09 1125 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 ANGPTL8Q6UXH0 198 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 TSPAN33Q86UF1 283 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 AMIGO1Q86WK6 493 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 ARIH2OSQ8N7S6 290 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 OR52P1PQ8NH57 321 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 C16orf78Q8WTQ4 265 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 TM9SF4Q92544 642 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 MAP6Q96JE9 813 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 RADILQ96JH8 1075 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 EFCAB11Q9BUY7 163 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 CPEB1Q9BZB8 566 aaKnown RBP14.78□□□□□ -0.04
CHD1L-205ENST00000467213 MCUBQ9NWR8 336 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 MARCH5Q9NX47 278 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 KLF15Q9UIH9 416 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 CBLCQ9ULV8 474 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 ING4Q9UNL4 249 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 HSPB11Q9Y547 144 aa14.78□□□□□ -0.04
CHD1L-205ENST00000467213 HELZP42694 1942 aaKnown RBP14.77□□□□□ -0.04
CHD1L-205ENST00000467213 COL4A6Q14031 1691 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ARHGEF33A8MVX0 844 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 UPK3BL1B0FP48 263 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 UPK3BL2E5RIL1 263 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 INMT-MINDY4F8WBC2 141 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 FHP07954 510 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 SPINT3P49223 89 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ADAM15Q13444 863 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 MINDY4Q4G0A6 757 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ATAT1Q5SQI0 421 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 MPP7Q5T2T1 576 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 SLC8B1Q6J4K2 584 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 GPR65Q8IYL9 337 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 SLC38A6Q8IZM9 456 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.04
CHD1L-205ENST00000467213 TTC16Q8NEE8 873 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 OR2AP1Q8NGE2 309 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ASIC4Q96FT7 647 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 BRD9Q9H8M2 597 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF275Q9NSD4 429 aaPredicted RBP14.77□□□□□ -0.04
CHD1L-205ENST00000467213 TMEM161AQ9NX61 479 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 GLTPQ9NZD2 209 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 ITM2BQ9Y287 266 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 SPEF1Q9Y4P9 236 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 KCNE2Q9Y6J6 123 aa14.77□□□□□ -0.04
CHD1L-205ENST00000467213 LINC00854A0A1B0GVQ3 168 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 A0A1W2PRB8 838 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 CATP04040 527 aaKnown RBP14.77□□□□□ -0.05
CHD1L-205ENST00000467213 KCNJ5P48544 419 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 ATP12AP54707 1039 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 ARMCX6Q7L4S7 300 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 COMMD6Q7Z4G1 85 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 GPR32P1Q8NGA4 272 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 OR4K1Q8NGD4 311 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 SKA2Q8WVK7 121 aaPredicted RBP14.77□□□□□ -0.05
CHD1L-205ENST00000467213 NLNQ9BYT8 704 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 TM6SF2Q9BZW4 377 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 GKN1Q9NS71 199 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 SRRDQ9UH36 339 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 TEKT2Q9UIF3 430 aa14.77□□□□□ -0.05
CHD1L-205ENST00000467213 TUBAL3A6NHL2 446 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 TPOP07202 933 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 PRKACBP22694 351 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 LHCGRP22888 699 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 MAPK12P53778 367 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 ARPP19P56211 112 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 RPS13P62277 151 aaKnown RBP14.76□□□□□ -0.05
CHD1L-205ENST00000467213 DDX39BQ13838 428 aaKnown RBP14.76□□□□□ -0.05
CHD1L-205ENST00000467213 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 TOR2AQ5JU69 321 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 FUT10Q6P4F1 479 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 TEX261Q6UWH6 196 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 Q6ZNB5 142 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 NR4A3Q92570 626 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 HGDQ93099 445 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 KCTD12Q96CX2 325 aaKnown RBP14.76□□□□□ -0.05
CHD1L-205ENST00000467213 HDHD5Q9BXW7 423 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 NLKQ9UBE8 527 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 U3KQ87 197 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 K7ERQ8 282 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 AKR7A2O43488 359 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 OR10H3O60404 316 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 HLA-DPB1P04440 258 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 GIPRP48546 466 aa14.76□□□□□ -0.05
CHD1L-205ENST00000467213 SMSP52788 366 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms