RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 KIR3DL1P43629 444 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 NRG3P56975 720 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 IGLV3-21P80748 117 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-206ENST00000466591 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 METTL2BQ6P1Q9 378 aaKnown RBP16.18■□□□□ 0.18
COL7A1-206ENST00000466591 B3GNT6Q6ZMB0 384 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 FMO2Q99518 471 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 DOHHQ9BU89 302 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 ZDHHC11Q9H8X9 412 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 PLSCR2Q9NRY7 297 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 CNIH4Q9P003 139 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 XPR1Q9UBH6 696 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
COL7A1-206ENST00000466591 A0A0A6YYD5 115 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 C2orf92A0A1B0GVN3 265 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 NKX2-6A6NCS4 301 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 FAM47E-STBD1D6RA91 191 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 HRKO00198 91 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 FOXE1O00358 373 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 AIFM1O95831 613 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 NT5EP21589 574 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 MASP1P48740 699 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 TMED10P49755 219 aaKnown RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 NUP107P57740 925 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 RPP38P78345 283 aaKnown RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 MYBPHQ13203 477 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 TOMM20Q15388 145 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 SPRED3Q2MJR0 410 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 TECRLQ5HYJ1 363 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 CCNYL2Q5T2Q4 361 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 LGSNQ5TDP6 509 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 FRG2Q64ET8 278 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 TRILQ7L0X0 811 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 CCDC71Q8IV32 467 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 GALNT12Q8IXK2 581 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 CLYBLQ8N0X4 340 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 DIO2Q92813 273 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 FRG2BQ96QU4 278 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 PAFAH2Q99487 392 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 WWTR1Q9GZV5 400 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 CDC42EP4Q9H3Q1 356 aaKnown RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 DDX31Q9H8H2 851 aaKnown RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 SEMA4BQ9NPR2 832 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-206ENST00000466591 ZDHHC18Q9NUE0 388 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 TNFRSF10DQ9UBN6 386 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
COL7A1-206ENST00000466591 GTF3C1Q12789 2109 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 A0A1W2PR48 441 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 AQP7O14520 342 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 TMPRSS11DO60235 418 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 KLK8O60259 260 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 WDR1O75083 606 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 GLSO94925 669 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-206ENST00000466591 SEMA3DO95025 777 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 IGKV3-11P04433 115 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 KLK1P06870 262 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 SLC35E2P0CK97 266 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 CNTFP26441 200 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 GDF1P27539 372 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 BSGP35613 385 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 NR0B1P51843 470 aaKnown RBP16.16■□□□□ 0.18
COL7A1-206ENST00000466591 MAPK12P53778 367 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 C10orf62Q5T681 223 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-206ENST00000466591 TMEM198Q66K66 360 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 DGAT2L6Q6ZPD8 337 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 MILR1Q7Z6M3 343 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 FBXW8Q8N3Y1 598 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 L3MBTL4Q8NA19 623 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 OR10G3Q8NGC4 313 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 OR4K14Q8NGD5 310 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 OR52B6Q8NGF0 335 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 LILRB4Q8NHJ6 448 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 C14orf79Q96F83 325 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 ZNF597Q96LX8 424 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 UCK2Q9BZX2 261 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 ZFP64Q9NPA5 681 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 PFDN4Q9NQP4 134 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 RYDENQ9NUL5 291 aaKnown RBP16.16■□□□□ 0.18
COL7A1-206ENST00000466591 NMRK1Q9NWW6 199 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 SLC12A4Q9UP95 1085 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 ASB4Q9Y574 426 aa16.16■□□□□ 0.18
COL7A1-206ENST00000466591 NCOA6Q14686 2063 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-206ENST00000466591 A0A087WUV0 522 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-206ENST00000466591 HMX2A2RU54 273 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 GOLGA6L10A6NI86 522 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 STX16-NPEPL1H3BU86 382 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 STX16O14662 325 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 SUSD5O60279 629 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 HCN1O60741 890 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 TRAPPC6AO75865 159 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 LRATO95237 230 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 ESRRBO95718 433 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 OTCP00480 354 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 CELA3AP09093 270 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 CAPN3P20807 821 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 ZFP36L2P47974 494 aaKnown RBP16.15■□□□□ 0.18
COL7A1-206ENST00000466591 ZNF791Q3KP31 576 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-206ENST00000466591 TBCELQ5QJ74 424 aa16.15■□□□□ 0.18
COL7A1-206ENST00000466591 C1orf185Q5T7R7 199 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms