RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 C11orf45Q8TAV5 145 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 FBXO25Q8TCJ0 367 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 DQX1Q8TE96 717 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMEM37Q8WXS4 190 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC45A3Q96JT2 553 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 PRICKLE1Q96MT3 831 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 STRADBQ9C0K7 418 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 RAB17Q9H0T7 212 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 NUDT4Q9NZJ9 180 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 THAP10Q9P2Z0 257 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ATG4BQ9Y4P1 393 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 CLCA3PQ9Y6N3 262 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZMYM6O95789 1325 aa3.63□□□□□ -1.83
CDC42BPA-211ENST00000466538 TCF20Q9UGU0 1960 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TRBV5-4A0A0C4DH59 114 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 LOC390937A0A1W2PQ73 354 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 IGLON5A6NGN9 336 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 H7C423 109 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 SOCS3O14543 225 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TXNL1O43396 289 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 BUB1O43683 1085 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 SNAP91O60641 907 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TRIM16O95361 564 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TGFAP01135 160 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 CALCAP01258 141 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 DPEP1P16444 411 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 SELEP16581 610 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 MAGEA4P43358 317 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 MTIF2P46199 727 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 NLRP11P59045 1033 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 HTD2P86397 168 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 ITPK1Q13572 414 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 SNX1Q13596 522 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 DPYSQ14117 519 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 PDIA5Q14554 519 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 RAET1GQ6H3X3 334 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 BNIPLQ7Z465 357 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM131BQ86XD5 332 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 BANPQ8N9N5 519 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 Q8NBF4 154 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TAF4BQ92750 862 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 NCLNQ969V3 563 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 PNPLA2Q96AD5 504 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMEM45BQ96B21 275 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 C16orf58Q96GQ5 468 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TNFRSF13CQ96RJ3 184 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 C19orf43Q9BQ61 176 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 JPH2Q9BR39 696 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 RAB11FIP5Q9BXF6 653 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 SP140LQ9H930 580 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 DEPPQ9NTK1 212 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 HPF1Q9NWY4 346 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 TAS2R3Q9NYW6 316 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 EPS15L1Q9UBC2 864 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 CIDEBQ9UHD4 219 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 RARRES3Q9UL19 164 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 PRSS21Q9Y6M0 314 aa3.62□□□□□ -1.83
CDC42BPA-211ENST00000466538 IGLV4-3A0A075B6K6 122 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMEM89A2RUT3 159 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 SH2D1BO14796 132 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 IGHG1P01857 330 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 GSTA1P08263 222 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 GHRP10912 638 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 CD1DP15813 335 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 RPA1P27694 616 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 CAPGP40121 348 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 CD86P42081 329 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 MATKP42679 507 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ERVK11-1P61568 191 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 RPS27AP62979 156 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 MYBPC1Q00872 1141 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 KLF5Q13887 457 aaPredicted RBP3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 CLPPQ16740 277 aaPredicted RBP3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZSWIM7Q19AV6 140 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 MUC21Q5SSG8 566 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 C12orf60Q5U649 245 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 METTL7BQ6UX53 244 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 BHLHA9Q7RTU4 235 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ADGRD2Q7Z7M1 963 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 SYVN1Q86TM6 617 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 RANBP3LQ86VV4 465 aaPredicted RBP3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ERC1Q8IUD2 1116 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 AQP11Q8NBQ7 271 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 BEST4Q8NFU0 473 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 OR56B1Q8NGI3 324 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 OR1K1Q8NGR3 316 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 PHYHIPQ92561 330 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 NABP1Q96AH0 204 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 COG3Q96JB2 828 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 RCHY1Q96PM5 261 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 ACCSQ96QU6 501 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 NDUFAF3Q9BU61 184 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms