RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ATP5A1P25705 553 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 STXBP1P61764 594 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 PPP2R2BQ00005 443 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 C2orf80Q0P641 193 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF385BQ569K4 471 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 OR4F3Q6IEY1 312 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TRIM40Q6P9F5 258 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 NUDT13Q86X67 352 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 MSRB3Q8IXL7 192 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 EID3Q8N140 333 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TMEM132CQ8N3T6 1108 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 OR52E6Q96RD3 313 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TOR3AQ9H497 397 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 SOX17Q9H6I2 414 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 DCAF13Q9NV06 445 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TBCCD1Q9NVR7 557 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 FAM118AQ9NWS6 357 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ERVK-11Q9UQG0 969 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ASXL3Q9C0F0 2248 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 SH3PXD2BA1X283 911 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF860A6NHJ4 632 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 GNGT2O14610 69 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 CD59P13987 128 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 COX7A2P14406 83 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 FOLR1P15328 257 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 EEF1B2P24534 225 aaKnown RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 GRK6P43250 576 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 OLR1P78380 273 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 SLAMF1Q13291 335 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 SUZ12Q15022 739 aaKnown RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 ZC3H12BQ5HYM0 836 aaKnown RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 PRAMEF17Q5VTA0 474 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 FAM71E1Q6IPT2 247 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 CAMKVQ8NCB2 501 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 OR6C4Q8NGE1 309 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 FBXO30Q8TB52 745 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 BORCS5Q969J3 196 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 TBC1D20Q96BZ9 403 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 ITCHQ96J02 903 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 EDEM2Q9BV94 578 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 SPRTNQ9H040 489 aaPredicted RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 KAT8Q9H7Z6 458 aaKnown RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 PDE7BQ9NP56 450 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 SLC25A37Q9NYZ2 338 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 C3orf18Q9UK00 162 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 MN1Q10571 1320 aaPredicted RBP17.58■□□□□ 0.4
CAPN3-209ENST00000466222 DMXL1Q9Y485 3027 aa17.58■□□□□ 0.4
CAPN3-209ENST00000466222 GLOD5A6NK44 160 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SCAMP2O15127 329 aaKnown RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 GDF9O60383 454 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 PFDN1O60925 122 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SMIM10L1P0DMW3 83 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 CRHBPP24387 322 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 GPR19Q15760 415 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 NEDD8Q15843 81 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ZIK1Q3SY52 487 aaPredicted RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ENPP6Q6UWR7 440 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 PAGE2Q7Z2X7 111 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 HIPK1Q86Z02 1210 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 RAB2BQ8WUD1 216 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 TESCQ96BS2 214 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SMIM10Q96HG1 83 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 CD180Q99467 661 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 CPPED1Q9BRF8 314 aaPredicted RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 PAIP1Q9H074 479 aaKnown RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SLC6A13Q9NSD5 602 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 FBXW2Q9UKT8 454 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ATG4BQ9Y4P1 393 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SNRNP200O75643 2136 aaKnown RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 CREG1O75629 220 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 C1QCP02747 245 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF883P0CG24 379 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ELK4P28324 431 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 S100A3P33764 101 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 TPD52P55327 224 aaPredicted RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 WNT3P56703 355 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ABHD18Q0P651 414 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 MPEG1Q2M385 716 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 CROCCQ5TZA2 2017 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 TMEM71Q6P5X7 295 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 ARHGEF39Q8N4T4 335 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 NAT6Q93015 286 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 GAL3ST3Q96A11 431 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 FAM120BQ96EK7 910 aaKnown RBP17.57■□□□□ 0.4
CAPN3-209ENST00000466222 INPP5KQ9BT40 448 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 DCUN1D5Q9BTE7 237 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 SH3BP4Q9P0V3 963 aa17.57■□□□□ 0.4
CAPN3-209ENST00000466222 PCM1Q15154 2024 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 TP53BP1Q12888 1972 aaPredicted RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 LDOC1O95751 146 aaPredicted RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 FURINP09958 794 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 CCNA2P20248 432 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 RANBP1P43487 201 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 ALDH9A1P49189 494 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 ENTPD1P49961 510 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 HSD11B2P80365 405 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF829Q3KNS6 432 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms