RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	T	O15178	435 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	POLR2D	O15514	142 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SLC7A4	O43246	635 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KLRC4	O43908	158 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CREG1	O75629	220 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PSMD10	O75832	226 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OR5F1	O95221	314 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GCNT3	O95395	438 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TDP2	O95551	362 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	POP4	O95707	220 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KRT14	P02533	472 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	APOE	P02649	317 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LIPF	P07098	398 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TPO	P07202	933 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FAM86B2	P0C5J1	330 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	POLR2M	P0CAP2	368 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	UBTFL6	P0CB48	400 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF286B	P0CG31	522 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PDGFRA	P16234	1089 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ARF4	P18085	180 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	VCL	P18206	1134 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CFL1	P23528	166 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DGKA	P23743	735 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ANXA13	P27216	316 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HSPA13	P48723	471 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FMO5	P49326	533 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LIG4	P49917	911 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ARSE	P51690	589 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	RPP38	P78345	283 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PPP2R5C	Q13362	524 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GNA13	Q14344	377 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PSMD6	Q15008	389 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	UBE2S	Q16763	222 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TMEM266	Q2M3C6	531 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C6orf163	Q5TEZ5	329 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TTC23L	Q6PF05	361 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C11orf88	Q6PI97	169 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FIGLA	Q6QHK4	219 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PLEKHM3	Q6ZWE6	761 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	BZW1	Q7L1Q6	419 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	VPS36	Q86VN1	386 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PHC2	Q8IXK0	858 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GUF1	Q8N442	669 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TMCO5A	Q8N6Q1	288 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OR8K3	Q8NH51	312 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PAGE5	Q96GU1	130 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CCDC42	Q96M95	316 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GDAP1L1	Q96MZ0	367 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF578	Q96N58	590 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C16orf70	Q9BSU1	422 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CCDC106	Q9BWC9	280 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FAM192A	Q9GZU8	254 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MIS12	Q9H081	205 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	NT5C3A	Q9H0P0	336 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MMP27	Q9H306	513 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EHD1	Q9H4M9	534 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SLA2	Q9H6Q3	261 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SLC35C2	Q9NQQ7	365 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KLHL1	Q9NR64	748 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	POLE3	Q9NRF9	147 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ANO10	Q9NW15	660 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HPF1	Q9NWY4	346 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	NPAP1	Q9NZP6	1156 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ANAPC5	Q9UJX4	755 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PROCR	Q9UNN8	238 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EXOC7	Q9UPT5	735 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DLGAP4	Q9Y2H0	992 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TRAV6	A0A075B6T7	132 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278		A0A1B0GUV1	79 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LOC105371267	A0A1B0GV96	52 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CTAGE9	A4FU28	777 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SERINC4	A6NH21	518 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GLOD5	A6NK44	160 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HEPACAM2	A8MVW5	462 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MAGEB17	A8MXT2	336 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ANKRD66	B4E2M5	251 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C16orf97	H3BN30	126 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GOLGA8S	H3BPF8	625 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	AP5Z1	O43299	807 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	BUB3	O43684	328 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SSX4	O60224	188 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PFDN1	O60925	122 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KRT6A	P02538	564 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OPN1MW	P04001	364 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DNTT	P04053	509 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KRT6B	P04259	564 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ALOX5	P09917	674 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CTAGE8	P0CG41	777 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OPN1MW2	P0DN77	364 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OPN1MW3	P0DN78	364 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PRKACB	P22694	351 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CTNNA2	P26232	953 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	RPA1	P27694	616 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	AXL	P30530	894 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SERPINB6	P35237	376 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SOX6	P35712	828 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CD86	P42081	329 aa		4.62	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PTGER3	P43115	390 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms