RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
ATF3-208ENST00000465155 SLC6A13Q9NSD5 602 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
ATF3-208ENST00000465155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.56□□□□□ -0.4
ATF3-208ENST00000465155 TAS2R9Q9NYW1 312 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 ERVK-11Q9UQG0 969 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 PCDHGA7Q9Y5G6 932 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
ATF3-208ENST00000465155 CDRT15L2A8MXV6 281 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 STMND1H3BQB6 276 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 OR10H2O60403 315 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 ERN1O75460 977 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 RECKO95980 971 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 HEXBP07686 556 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 GPC1P35052 558 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 TRPC1P48995 793 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 RASSF2P50749 326 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 IGLV3-21P80748 117 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 CAPRIN1Q14444 709 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 PUM1Q14671 1186 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATF3-208ENST00000465155 NCF4Q15080 339 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 LTB4RQ15722 352 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NSDHLQ15738 373 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 GTDC1Q4AE62 458 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 LACTB2Q53H82 288 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 LRIF1Q5T3J3 769 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 DLEU7Q6UYE1 221 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ZNF621Q6ZSS3 439 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 TMEM151BQ8IW70 566 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NLGN4XQ8N0W4 816 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ESX1Q8N693 406 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NLGN4YQ8NFZ3 816 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 DNAJB8Q8NHS0 232 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 TSLPQ969D9 159 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 SPSB2Q99619 263 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 WDR54Q9H977 334 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NEUROD4Q9HD90 331 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ASCL3Q9NQ33 180 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 TAS2R1Q9NYW7 299 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NXT1Q9UKK6 140 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 VPS4AQ9UN37 437 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 PCDHB14Q9Y5E9 798 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 SNX8Q9Y5X2 465 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 IDSB3KWA1 339 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 FXYD1O00168 92 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 RAD1O60671 282 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NPPAP01160 153 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 IFNA16P05015 189 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ATP1B1P05026 303 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 SLC35E2P0CK97 266 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 TCN2P20062 427 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NT5EP21589 574 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 PTPN4P29074 926 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 PTPN6P29350 595 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 SOAT1P35610 550 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 CPOXP36551 454 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 CDK9P50750 372 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 NCALDP61601 193 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 SERTAD2Q14140 314 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 MAP7Q14244 749 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 FAAH2Q6GMR7 532 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 C16orf89Q6UX73 402 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 HACD2Q6Y1H2 254 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 ZNF771Q7L3S4 317 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 ST13P4Q8IZP2 240 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 PLPP5Q8NEB5 264 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 GOT1L1Q8NHS2 421 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 CT55Q8WUE5 264 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 DGAT2Q96PD7 388 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 CRB3Q9BUF7 120 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 C1orf21Q9H246 121 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 SLC25A37Q9NYZ2 338 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 VAPAQ9P0L0 249 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.55□□□□□ -0.4
ATF3-208ENST00000465155 CROTQ9UKG9 612 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 KLK13Q9UKR3 277 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
ATF3-208ENST00000465155 GYG2O15488 501 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 BRINP1O60477 761 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 HOXB9P17482 250 aaPredicted RBP12.54□□□□□ -0.4
ATF3-208ENST00000465155 CD82P27701 267 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 STT3AP46977 705 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 EMP2P54851 167 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 BIKQ13323 160 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 GAB1Q13480 694 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 FAM69BQ5VUD6 431 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 CPZQ66K79 652 aa12.54□□□□□ -0.4
ATF3-208ENST00000465155 TMEM107Q6UX40 140 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms