RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CDHR1Q96JP9 859 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 COQ7Q99807 217 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 DCTN5Q9BTE1 182 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 MOB1AQ9H8S9 216 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 SP140LQ9H930 580 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 HPS4Q9NQG7 708 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 DEPPQ9NTK1 212 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 HOOK1Q9UJC3 728 aaKnown RBP3.38□□□□□ -1.87
CLK1-208ENST00000464454 RAD54L2Q9Y4B4 1467 aa3.38□□□□□ -1.87
CLK1-208ENST00000464454 IGLV4-3A0A075B6K6 122 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 BCLAF3A2AJT9 711 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 KRT87PA6NCN2 255 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 MEI4A8MW99 385 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 A8MXK9 166 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 ARPC1BO15143 372 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 SSX5O60225 188 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 TSPAN2O60636 221 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 POP4O95707 220 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 CXCL10P02778 98 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 ETS1P14921 441 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 MAPK3P27361 379 aaPredicted RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 MTIF2P46199 727 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 SLC1A6P48664 564 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 NUMBP49757 651 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 RIDAP52758 137 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 SNAI3Q3KNW1 292 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 CMPK2Q5EBM0 449 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 DCAF12Q5T6F0 453 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 OR6B2Q6IFH4 312 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 WDR88Q6ZMY6 472 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 C1orf186Q6ZWK4 172 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 ITIH5Q86UX2 942 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 RNF130Q86XS8 419 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 MRPL43Q8N983 215 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 FBXO25Q8TCJ0 367 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
CLK1-208ENST00000464454 NABP1Q96AH0 204 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 C16orf58Q96GQ5 468 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 RCHY1Q96PM5 261 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 CHCHD5Q9BSY4 110 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 FTHL17Q9BXU8 183 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 NACA2Q9H009 215 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 ATG10Q9H0Y0 220 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 C1orf21Q9H246 121 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 KLK13Q9UKR3 277 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 ENTPD4Q9Y227 616 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 AUP1Q9Y679 476 aa3.37□□□□□ -1.87
CLK1-208ENST00000464454 TRGV8A0A0C4DH27 118 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 TRBV5-4A0A0C4DH59 114 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 LOC390937A0A1W2PQ73 354 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 PRPSAP2O60256 369 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 LRP3O75074 770 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 SYNGR4O95473 234 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 MT-ATP6P00846 226 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 FCER2P06734 321 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 GNSP15586 552 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 ZNF10P21506 573 aaPredicted RBP3.36□□□□□ -1.87
CLK1-208ENST00000464454 OXTRP30559 389 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 CCL11P51671 97 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 ZNF131P52739 623 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 ATXN3P54252 364 aaPredicted RBP3.36□□□□□ -1.87
CLK1-208ENST00000464454 NDUFV3P56181 108 aaKnown RBP3.36□□□□□ -1.87
CLK1-208ENST00000464454 IL1RL1Q01638 556 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 MUC21Q5SSG8 566 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 FAM182AQ5T1J6 154 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 LIPJQ5W064 366 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 OLFM4Q6UX06 510 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 ASRGL1Q7L266 308 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 BNIPLQ7Z465 357 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 KDM8Q8N371 416 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 COLGALT1Q8NBJ5 622 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 RDH11Q8TC12 318 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 P3H4Q92791 437 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 COG3Q96JB2 828 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 CAPNS2Q96L46 248 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 TAAR6Q96RI8 345 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 JPH2Q9BR39 696 aaPredicted RBP3.36□□□□□ -1.87
CLK1-208ENST00000464454 CBWD1Q9BRT8 395 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 TUBB1Q9H4B7 451 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 DCTPP1Q9H773 170 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 SLC25A19Q9HC21 320 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 NINJ2Q9NZG7 142 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 SPASTQ9UBP0 616 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 RARRES3Q9UL19 164 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 PIN4Q9Y237 131 aaKnown RBP3.36□□□□□ -1.87
CLK1-208ENST00000464454 PTPRUQ92729 1446 aa3.36□□□□□ -1.87
CLK1-208ENST00000464454 COL5A2P05997 1499 aaPredicted RBP3.35□□□□□ -1.87
CLK1-208ENST00000464454 TDRD15B5MCY1 1934 aaKnown RBP3.35□□□□□ -1.87
CLK1-208ENST00000464454 A0A0U1RRA0 63 aa3.35□□□□□ -1.87
CLK1-208ENST00000464454 ZNF724A8MTY0 619 aa3.35□□□□□ -1.87
CLK1-208ENST00000464454 K7EQG2 157 aa3.35□□□□□ -1.87
CLK1-208ENST00000464454 SH2D1BO14796 132 aa3.35□□□□□ -1.87
CLK1-208ENST00000464454 OR6B1O95007 311 aa3.35□□□□□ -1.87
CLK1-208ENST00000464454 PDGFBP01127 241 aaPredicted RBP3.35□□□□□ -1.87
CLK1-208ENST00000464454 SHC1P29353 583 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms