RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 URADA6NGE7 173 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 ZNF888P0CJ79 500 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 ITGA2P17301 1181 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 DAPP51397 102 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 UBXN2BQ14CS0 331 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 LEXMQ3ZCV2 418 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 FGD3Q5JSP0 725 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 C18orf63Q68DL7 685 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 KDM4DQ6B0I6 523 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 TSEN54Q7Z6J9 526 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 CYP4Z1Q86W10 505 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 FAM160A2Q8N612 972 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 SLC38A5Q8WUX1 472 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 GEMIN6Q8WXD5 167 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 GIMAP4Q9NUV9 329 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 NDUFAF4Q9P032 175 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 RAB23Q9ULC3 237 aa20.54■□□□□ 0.88
PDLIM2-216ENST00000464275 ADAMDEC1O15204 470 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 MRPS14O60783 128 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 CTSVO60911 334 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 BCL10O95999 233 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 BCHEP06276 602 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 INHBBP09529 407 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 TFPTP0C1Z6 253 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 SMIM10L1P0DMW3 83 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 ZNF12P17014 697 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 PIGAP37287 484 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 ISL1P61371 349 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 CD47Q08722 323 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 KEAP1Q14145 624 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 SUZ12Q15022 739 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 LINC00299Q6ZSB3 139 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 RBM12BQ8IXT5 1001 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 CAMKVQ8NCB2 501 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 MUL1Q969V5 352 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 MOAP1Q96BY2 351 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 SMIM10Q96HG1 83 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 MAPKAP1Q9BPZ7 522 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 ZNF451Q9Y4E5 1061 aa20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 TP53BP1Q12888 1972 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-216ENST00000464275 TNRC18O15417 2968 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 WASHC1A8K0Z3 465 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 HMGN4O00479 90 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 NDUFS2O75306 463 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 PDE9AO76083 593 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 CSNK2A2P19784 350 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 MATN1P21941 496 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 RRM2P31350 389 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 CXCR4P61073 352 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 Q6ZNX1 250 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 PIK3C3Q8NEB9 887 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 CNRIP1Q96F85 164 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 TMEM19Q96HH6 336 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 ZNF300Q96RE9 604 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 ZCCHC3Q9NUD5 404 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 HRASLS2Q9NWW9 162 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 SCN2AQ99250 2005 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 TMEM131Q92545 1883 aa20.52■□□□□ 0.88
PDLIM2-216ENST00000464275 A0A0J9YY10 115 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 TMEM247A6NEH6 219 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 BCKDKO14874 412 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 RANBP1P43487 201 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 C1orf61Q13536 156 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 LAPTM4AQ15012 233 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 CEBPEQ15744 281 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 BHLHB9Q6PI77 547 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 SUN3Q8TAQ9 357 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 ZDHHC1Q8WTX9 485 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 RAB8BQ92930 207 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 SERINC2Q96SA4 455 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 ZFYVE21Q9BQ24 234 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 LHPPQ9H008 270 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 CHRDQ9H2X0 955 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 HEMK1Q9Y5R4 338 aaPredicted RBP20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 SLCO1B1Q9Y6L6 691 aa20.52■□□□□ 0.87
PDLIM2-216ENST00000464275 SLC1A7O00341 560 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 P2RX6O15547 441 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 IL7RP16871 459 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 JUNDP17535 347 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 TNFRSF1BP20333 461 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 CD27P26842 260 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 ANXA11P50995 505 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 STARD6P59095 220 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 TMED1Q13445 227 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 SFTPA2Q8IWL1 248 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 BAHD1Q8TBE0 780 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 NODALQ96S42 347 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 OR51I1Q9H343 314 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 SERHL2Q9H4I8 314 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 FAIMQ9NVQ4 179 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 KIF17Q9P2E2 1029 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 PHF11Q9UIL8 331 aa20.51■□□□□ 0.87
PDLIM2-216ENST00000464275 KRBA1A5PL33 1030 aa20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 FAM170BA6NMN3 283 aa20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 B4GAT1O43505 415 aa20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 PRAMEF10O60809 474 aa20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 MITFO75030 526 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 CBFA2T3O75081 653 aa20.5■□□□□ 0.87
PDLIM2-216ENST00000464275 JRKO75564 520 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms