RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 GALNT7Q86SF2 657 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
MRPL55-224ENST00000464148 ACOT4Q8N9L9 421 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 SRFBP1Q8NEF9 429 aaKnown RBP12.18□□□□□ -0.46
MRPL55-224ENST00000464148 NANOS1Q8WY41 292 aaKnown RBP12.18□□□□□ -0.46
MRPL55-224ENST00000464148 SMPDL3BQ92485 455 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 ISL2Q96A47 359 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 JKAMPQ9P055 326 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
MRPL55-224ENST00000464148 CNOT11Q9UKZ1 510 aaKnown RBP12.18□□□□□ -0.46
MRPL55-224ENST00000464148 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 CCDC188H7C350 402 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 TP53I11O14683 189 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 FGF17O60258 216 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 TRIM3O75382 744 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 IL18BPO95998 194 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 TMIGD3P0DMS9 266 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ATP5A1P25705 553 aaKnown RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 MASP1P48740 699 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 PLIN5Q00G26 463 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 RCAN2Q14206 197 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 TSNQ15631 228 aaKnown RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 AP5B1Q2VPB7 878 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 CCDC137Q6PK04 289 aaKnown RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ZNF793Q6ZN11 406 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 LUZP2Q86TE4 346 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ADAMTSL2Q86TH1 951 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 SNX31Q8N9S9 440 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 DOK4Q8TEW6 326 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ANKRD7Q92527 254 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 PIGTQ969N2 578 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 RHBDF1Q96CC6 855 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 FBXL20Q96IG2 436 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 KRT12Q99456 494 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 NAT9Q9BTE0 207 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 TBCDQ9BTW9 1192 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 EHD1Q9H4M9 534 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 CALHM2Q9HA72 323 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 DNAJC11Q9NVH1 559 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 GALNT8Q9NY28 637 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 GPRC5BQ9NZH0 403 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ZNF490Q9ULM2 529 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 V9GYY5 206 aaPredicted RBP12.17□□□□□ -0.46
MRPL55-224ENST00000464148 KIAA1549Q9HCM3 1950 aa12.17□□□□□ -0.46
MRPL55-224ENST00000464148 ANKRD33BA6NCL7 494 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 CAPN14A8MX76 684 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 RTCAO00442 366 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 HPNP05981 417 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 BMP7P18075 431 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 HIST1H1TP22492 207 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 CDK9P50750 372 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 HERVK_113P63132 956 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 ERVK-8P63133 956 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 IGLV3-21P80748 117 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 BIKQ13323 160 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 DOC2AQ14183 400 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 ZNF460Q14592 562 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 NTRK2Q16620 822 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 HIST2H2ACQ16777 129 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 HIST2H2AA3Q6FI13 130 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 RNF111Q6ZNA4 994 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 YTHDF3Q7Z739 585 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 PACS2Q86VP3 889 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 TAGAPQ8N103 731 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 ABTB1Q969K4 478 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 PTCD3Q96EY7 689 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 CFAP36Q96G28 342 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 RILPQ96NA2 401 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 GNRHR2Q96P88 292 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 PIP5K1AQ99755 562 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 ERVK-6Q9BXR3 956 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 UGT2B28Q9BY64 529 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 PHACTR1Q9C0D0 580 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 WWTR1Q9GZV5 400 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 RPF2Q9H7B2 306 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 CNOT10Q9H9A5 744 aaKnown RBP12.16□□□□□ -0.46
MRPL55-224ENST00000464148 WWOXQ9NZC7 414 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 NDRG3Q9UGV2 375 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 ERVK-19Q9WJR5 959 aa12.16□□□□□ -0.46
MRPL55-224ENST00000464148 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 NINQ8N4C6 2090 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 OR10H2O60403 315 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 SNX4O95219 450 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 FREM3P0C091 2139 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 CYP4B1P13584 511 aa12.15□□□□□ -0.46
MRPL55-224ENST00000464148 ALOX15P16050 662 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms