RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MDS2Q8NDY4 140 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 OR8K3Q8NH51 312 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 TWIST2Q8WVJ9 160 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 MIB2Q96AX9 1013 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 C19orf60Q96EN9 201 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 CNRIP1Q96F85 164 aaPredicted RBP16.44■□□□□ 0.22
VPS52-214ENST00000463486 FBXL20Q96IG2 436 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 SIGLEC12Q96PQ1 595 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 SH3GL2Q99962 352 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 CXorf21Q9HAI6 301 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
VPS52-214ENST00000463486 BAHCC1Q9P281 2608 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 DYTNA2CJ06 578 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 TTLL8A6PVC2 850 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 GABRR3A8MPY1 467 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 TMEM114B3SHH9 223 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 PYCARD-AS1I3L0S3 204 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 CDK2AP1O14519 115 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 LSM1O15116 133 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 ZNF354AO60765 605 aaPredicted RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 NEURL1O76050 574 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 JUNP05412 331 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 PIK3R1P27986 724 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 ABCE1P61221 599 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 RNF4P78317 190 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 CEBPEQ15744 281 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 IGFBP7Q16270 282 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 IMPG1Q17R60 797 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 RPUSD3Q6P087 351 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 FAM180BQ6P0A1 224 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 HSDL2Q6YN16 418 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 C9orf40Q8IXQ3 194 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 ANKRD42Q8N9B4 389 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 AGR3Q8TD06 166 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 THAP3Q8WTV1 239 aaPredicted RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 SREK1Q8WXA9 508 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 RIT1Q92963 219 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 SNRNP40Q96DI7 357 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 PELOQ9BRX2 385 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 ILKAPQ9H0C8 392 aaPredicted RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 LIN28AQ9H9Z2 209 aaKnown RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 SLAMF7Q9NQ25 335 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 C1orf109Q9NX04 203 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 ANKRD10Q9NXR5 420 aa16.43■□□□□ 0.22
VPS52-214ENST00000463486 POLR3HQ9Y535 204 aaPredicted RBP16.43■□□□□ 0.22
VPS52-214ENST00000463486 TRAV17A0A0B4J275 112 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 RGS14O43566 566 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 SEC22BO75396 215 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 SASH3O75995 380 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 ATP1B1P05026 303 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 COX7A2P14406 83 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 PORP16435 677 aaPredicted RBP16.42■□□□□ 0.22
VPS52-214ENST00000463486 GRK2P25098 689 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 FEN1P39748 380 aaKnown RBP16.42■□□□□ 0.22
VPS52-214ENST00000463486 GSTM5P46439 218 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 HK2P52789 917 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 SLC37A1P57057 533 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 ZNF763Q0D2J5 394 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 BST1Q10588 318 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 FUT7Q11130 342 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 ZNF267Q14586 743 aaPredicted RBP16.42■□□□□ 0.22
VPS52-214ENST00000463486 SPINK14Q6IE38 97 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 HDXQ7Z353 690 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 HOMEZQ8IX15 550 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 CISD2Q8N5K1 135 aaKnown RBP16.42■□□□□ 0.22
VPS52-214ENST00000463486 ZNF781Q8N8C0 355 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 CPT1CQ8TCG5 803 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 EGLN2Q96KS0 407 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 FAIM2Q9BWQ8 316 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 MYNNQ9NPC7 610 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 TAS2R7Q9NYW3 318 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 MYOTQ9UBF9 498 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 GIMAP2Q9UG22 337 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
VPS52-214ENST00000463486 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.42■□□□□ 0.22
VPS52-214ENST00000463486 GOLGA6L10A6NI86 522 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 J3QKU1 62 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 OR10H2O60403 315 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 PRAMEF2O60811 474 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ITGA10O75578 1167 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 CHEK2O96017 543 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 NEFHP12036 1026 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 CSNK2A2P19784 350 aaPredicted RBP16.41■□□□□ 0.22
VPS52-214ENST00000463486 DDCP20711 480 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 PTGER1P34995 402 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 SLC1A6P48664 564 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 HLCSP50747 726 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ERVK-8P63133 956 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 MAP4K2Q12851 820 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 DUSP8Q13202 625 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 HEPACAMQ14CZ8 416 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 PRICKLE4Q2TBC4 344 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 HHATQ5VTY9 493 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 ZNF615Q8N8J6 731 aa16.41■□□□□ 0.22
VPS52-214ENST00000463486 SIMC1Q8NDZ2 872 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms