RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LYPD8Q6UX82 237 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 FBXW8Q8N3Y1 598 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 RBBP8Q99708 897 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 GPATCH1Q9BRR8 931 aaKnown RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 CLEC4MQ9H2X3 399 aaPredicted RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 ZNF703Q9H7S9 590 aaPredicted RBP18.22■□□□□ 0.51
VARS-221ENST00000463184 CAB39LQ9H9S4 337 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 RASSF1Q9NS23 344 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.22■□□□□ 0.51
VARS-221ENST00000463184 CNIH4Q9P003 139 aa18.22■□□□□ 0.51
VARS-221ENST00000463184 TGFB1P01137 390 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 S100BP04271 92 aaPredicted RBP18.21■□□□□ 0.51
VARS-221ENST00000463184 RFPL3SP0C7P2 107 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 SERPINB1P30740 379 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 SSR2P43308 183 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 PLIN5Q00G26 463 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 MED27Q6P2C8 311 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 LRRC70Q7Z2Q7 622 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 OR4N5Q8IXE1 308 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 LAS2Q8IYD9 372 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 ULK2Q8IYT8 1036 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 LRRC25Q8N386 305 aaPredicted RBP18.21■□□□□ 0.51
VARS-221ENST00000463184 NEIL3Q8TAT5 605 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 TANKQ92844 425 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 PPWD1Q96BP3 646 aaKnown RBP18.21■□□□□ 0.51
VARS-221ENST00000463184 LRRC46Q96FV0 321 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 CMTM7Q96FZ5 175 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 RMND5BQ96G75 393 aaPredicted RBP18.21■□□□□ 0.51
VARS-221ENST00000463184 CD244Q9BZW8 370 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 RPF2Q9H7B2 306 aaKnown RBP18.21■□□□□ 0.51
VARS-221ENST00000463184 CRIM1Q9NZV1 1036 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 RNF112Q9ULX5 631 aa18.21■□□□□ 0.51
VARS-221ENST00000463184 ZNF469Q96JG9 3925 aaPredicted RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 AHRRA9YTQ3 701 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 PHGDHO43175 533 aaKnown RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 RIPK2O43353 540 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 TUBBP07437 444 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 PCNAP12004 261 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 STMN1P16949 149 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 KLK2P20151 261 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 DNASE1P24855 282 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 SERPINB3P29508 390 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 TLX1P31314 330 aaPredicted RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 UQCRC1P31930 480 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 SLAMF1Q13291 335 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 SNTB1Q13884 538 aaKnown RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 PRAMEF20Q5VT98 475 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 OR4C11Q6IEV9 310 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 LIX1Q8N485 282 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 GOT1L1Q8NHS2 421 aaPredicted RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 FBXL20Q96IG2 436 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 PARD6BQ9BYG5 372 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 LIME1Q9H400 295 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 PROK2Q9HC23 129 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 ADGRE2Q9UHX3 823 aa18.2■□□□□ 0.5
VARS-221ENST00000463184 CHCHD2Q9Y6H1 151 aaPredicted RBP18.2■□□□□ 0.5
VARS-221ENST00000463184 ABCA4P78363 2273 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 IQANK1A0A1B0GTG1 560 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 DVL2O14641 736 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 SH3BGRLO75368 114 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 FAM155BO75949 473 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 FBXO45P0C2W1 286 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 ALOX15P16050 662 aaPredicted RBP18.19■□□□□ 0.5
VARS-221ENST00000463184 PCDH1Q08174 1060 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 AKAP6Q13023 2319 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 CEBPEQ15744 281 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 DEPDC1Q5TB30 811 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 KHDRBS2Q5VWX1 349 aaKnown RBP18.19■□□□□ 0.5
VARS-221ENST00000463184 DGAT2L6Q6ZPD8 337 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 SEM1Q6ZVN7 128 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 SLC29A4Q7RTT9 530 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 ST13P4Q8IZP2 240 aaPredicted RBP18.19■□□□□ 0.5
VARS-221ENST00000463184 FAM13CQ8NE31 585 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 OR7G3Q8NG95 312 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 UHMK1Q8TAS1 419 aaKnown RBP18.19■□□□□ 0.5
VARS-221ENST00000463184 FAM222BQ8WU58 562 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 UBXN10Q96LJ8 280 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 GPR22Q99680 433 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 SLC6A15Q9H2J7 730 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 RRAGDQ9NQL2 400 aaPredicted RBP18.19■□□□□ 0.5
VARS-221ENST00000463184 PHF11Q9UIL8 331 aa18.19■□□□□ 0.5
VARS-221ENST00000463184 LRRC3CA6NJW4 275 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 A6NNC1 897 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 HRKO00198 91 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 SAP18O00422 153 aaKnown RBP18.18■□□□□ 0.5
VARS-221ENST00000463184 ASCL1P50553 236 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 SLC29A2Q14542 456 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 FLYWCH1Q4VC44 716 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 TBCELQ5QJ74 424 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 GPR180Q86V85 440 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 OR10G3Q8NGC4 313 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 STAG3L4Q8TBR4 150 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 SLC44A1Q8WWI5 657 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 RGMAQ96B86 450 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 MRRFQ96E11 262 aaKnown RBP18.18■□□□□ 0.5
VARS-221ENST00000463184 JSRP1Q96MG2 331 aaPredicted RBP18.18■□□□□ 0.5
VARS-221ENST00000463184 ALPK1Q96QP1 1244 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 PELOQ9BRX2 385 aaKnown RBP18.18■□□□□ 0.5
VARS-221ENST00000463184 CENPKQ9BS16 269 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 DOHHQ9BU89 302 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms