RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 STX4Q12846 297 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 POU4F3Q15319 338 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 FBXL19-AS1Q494R0 122 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 TMEM64Q6YI46 380 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 BIVMQ86UB2 503 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 CIARTQ8N365 385 aaPredicted RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 RNF175Q8N4F7 328 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 C18orf12Q96KH6 178 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 JSRP1Q96MG2 331 aaPredicted RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 CNOT10Q9H9A5 744 aaKnown RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 ZFP64Q9NPA5 681 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 PPANQ9NQ55 473 aaKnown RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 B4GALT7Q9UBV7 327 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 CNOT11Q9UKZ1 510 aaKnown RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 CHMP2BQ9UQN3 213 aa14.4□□□□□ -0.1
SND1-203ENST00000463020 MRPS33Q9Y291 106 aaKnown RBP14.4□□□□□ -0.1
SND1-203ENST00000463020 MPDZO75970 2070 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 HSPB2A8KAH6 182 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 CLPSP04118 112 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 GABRA1P14867 456 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 CD53P19397 219 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 SOX18P35713 384 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 ELK3P41970 407 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 KCNJ2P63252 427 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 CDKL1Q00532 357 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 DUSP8Q13202 625 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 DOC2AQ14183 400 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 HSPB2Q16082 182 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 MPEG1Q2M385 716 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 SLC22A10Q63ZE4 541 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 TRIM40Q6P9F5 258 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 PLXDC2Q6UX71 529 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 CAMKMTQ7Z624 323 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 CCDC25Q86WR0 208 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 FBXW8Q8N3Y1 598 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 SPACA9Q96E40 222 aaPredicted RBP14.39□□□□□ -0.11
SND1-203ENST00000463020 PGM2Q96G03 612 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 SENP5Q96HI0 755 aaPredicted RBP14.39□□□□□ -0.11
SND1-203ENST00000463020 ROPN1BQ9BZX4 212 aaPredicted RBP14.39□□□□□ -0.11
SND1-203ENST00000463020 EPB41L4BQ9H329 900 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 NT5DC2Q9H857 520 aa14.39□□□□□ -0.11
SND1-203ENST00000463020 ROPN1Q9HAT0 212 aaPredicted RBP14.39□□□□□ -0.11
SND1-203ENST00000463020 TLN2Q9Y4G6 2542 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 SAP18O00422 153 aaKnown RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 DNALI1O14645 258 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 RGS16O15492 202 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 RIPK2O43353 540 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 TTC4O95801 387 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 EPPINO95925 133 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 INHBBP09529 407 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 ATP5A1P25705 553 aaKnown RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 HPDP32754 393 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 IGLV3-21P80748 117 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 KEAP1Q14145 624 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 STEAP4Q687X5 459 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 CLEC9AQ6UXN8 241 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 ZC3HC1Q86WB0 502 aaKnown RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 ACOT4Q8N9L9 421 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 FAM13CQ8NE31 585 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 TTLQ8NG68 377 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 OR5L2Q8NGL0 311 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 UCN3Q969E3 161 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 TIMP4Q99727 224 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 COPS7BQ9H9Q2 264 aaPredicted RBP14.38□□□□□ -0.11
SND1-203ENST00000463020 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 ACKR4Q9NPB9 350 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 SLC6A5Q9Y345 797 aa14.38□□□□□ -0.11
SND1-203ENST00000463020 C15orf38-AP3S2A0A0A6YYH1 394 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 FAM95CA0A1B0GW59 222 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 A0A1W2PS29 197 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 ANKDD1BA6NHY2 528 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 DVL2O14641 736 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 H2AFYO75367 372 aaKnown RBP14.37□□□□□ -0.11
SND1-203ENST00000463020 TRIM3O75382 744 aaPredicted RBP14.37□□□□□ -0.11
SND1-203ENST00000463020 LY6G6DO95868 133 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 HRGP04196 525 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 FREM3P0C091 2139 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 FBXO45P0C2W1 286 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 EPXP11678 715 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 IVDP26440 423 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 STT3AP46977 705 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 HSPA7P48741 367 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 EFTUD2Q15029 972 aaKnown RBP eCLIP14.37□□□□□ -0.11
SND1-203ENST00000463020 TGFBIQ15582 683 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 C18orf63Q68DL7 685 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 CXorf67Q86X51 503 aaPredicted RBP14.37□□□□□ -0.11
SND1-203ENST00000463020 KRT78Q8N1N4 520 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 NUBPLQ8TB37 319 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 MCMBPQ9BTE3 642 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 MS4A8Q9BY19 250 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 FAM107BQ9H098 131 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 CTNNAL1Q9UBT7 734 aa14.37□□□□□ -0.11
SND1-203ENST00000463020 COL6A5A8TX70 2615 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 MED12Q93074 2177 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 TUBAL3A6NHL2 446 aa14.36□□□□□ -0.11
SND1-203ENST00000463020 CLCA1A8K7I4 914 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms