RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RAB40ALP0C0E4 278 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 NELFEP18615 380 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 XRCC1P18887 633 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 LHCGRP22888 699 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 HNRNPH3P31942 346 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 CASP14P31944 242 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 CLCNKAP51800 687 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 NUDT6P53370 316 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 LRRC63Q05C16 580 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 KIR2DS5Q14953 304 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ZNF630Q2M218 657 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 FNBP1LQ5T0N5 605 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ZNF324BQ6AW86 544 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 PWWP2BQ6NUJ5 590 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 C8orf82Q6P1X6 216 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 TMEM154Q6P9G4 183 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 FAM199XQ6PEV8 388 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 KRBA2Q6ZNG9 492 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ENOSF1Q7L5Y1 443 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 CUZD1Q86UP6 607 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 UMODL1-AS1Q8N2C9 162 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ZBTB2Q8N680 514 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 RTL3Q8N8U3 475 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 NSMCE1Q8WV22 266 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 TBC1D31Q96DN5 1066 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 SLC41A2Q96JW4 573 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 CFAP57Q96MR6 1250 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 LRFN5Q96NI6 719 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ZNF570Q96NI8 536 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 AGAP3Q96P47 875 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 OR6C1Q96RD1 312 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 MCCC1Q96RQ3 725 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 TBC1D10AQ9BXI6 508 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ITPAQ9BY32 194 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 LRRC19Q9H756 370 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 CLK4Q9HAZ1 481 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 SCPEP1Q9HB40 452 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 SLC6A13Q9NSD5 602 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 GPR83Q9NYM4 423 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 RNF7Q9UBF6 113 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 TBC1D29Q9UFV1 150 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 MOSPD1Q9UJG1 213 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 FARSAQ9Y285 508 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 CD8B2A6NJW9 211 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 OR5K4A6NMS3 321 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 GTPBP1O00178 669 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 PRAMEF11O60813 436 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 DIAPH2O60879 1101 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 PTP4A3O75365 173 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 TIPRLO75663 272 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 RGS11O94810 467 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 PLEKP08567 350 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 KRT5P13647 590 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 F3P13726 295 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 FOLR1P15328 257 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ZNF182P17025 639 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 EDN2P20800 178 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 CA5AP35218 305 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 RORAP35398 523 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 SYKP43405 635 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 AMTP48728 403 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 NDUFA8P51970 172 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ZBED6P86452 979 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 Q0VFX4 171 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 AIMP2Q13155 320 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 GPS2Q13227 327 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 NFATC2Q13469 925 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 CRYMQ14894 314 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ADIPOQQ15848 244 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 PARP15Q460N3 678 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 CCDC14Q49A88 953 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 LCN10Q6JVE6 187 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 LRRC8EQ6NSJ5 796 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 TTI2Q6NXR4 508 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 METTL2BQ6P1Q9 378 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 FAM198BQ6UWH4 519 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 IGFL2Q6UWQ7 119 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 TMEM26Q6ZUK4 368 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 STRADAQ7RTN6 431 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 HSD11B1LQ7Z5J1 315 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 SLC9B2Q86UD5 537 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 TDRPQ86YL5 185 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 SLC38A9Q8NBW4 561 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 GPT2Q8TD30 523 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 SCARB1Q8WTV0 552 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 CCDC47Q96A33 483 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 NTAN1Q96AB6 310 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 MMABQ96EY8 250 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 METTL2AQ96IZ6 378 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 SLX1AQ9BQ83 275 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ABCG8Q9H221 673 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ATP13A3Q9H7F0 1226 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 UBE2TQ9NPD8 197 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 EIF2B3Q9NR50 452 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 NSMCE4AQ9NXX6 385 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms