RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCL3P10147 92 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 FOXO1Q12778 655 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 LGSNQ5TDP6 509 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 OR52E8Q6IFG1 317 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 PAOXQ6QHF9 649 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 LYPD8Q6UX82 237 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 TIFABQ6ZNK6 161 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 RPS27LQ71UM5 84 aaKnown RBP17.5■□□□□ 0.39
VARS-220ENST00000461874 SLC15A4Q8N697 577 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 OR4F6Q8NGB9 312 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 KIF18AQ8NI77 898 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 SLC22A8Q8TCC7 542 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 ZNF483Q8TF39 744 aaPredicted RBP17.5■□□□□ 0.39
VARS-220ENST00000461874 C1QTNF3Q9BXJ4 246 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 IL1RL2Q9HB29 575 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 SH2D2AQ9NP31 389 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 AHSPQ9NZD4 102 aa17.5■□□□□ 0.39
VARS-220ENST00000461874 APCP25054 2843 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 A0A1B0GTL3 188 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 A8MT66 165 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 PPP6CO00743 305 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 OTCP00480 354 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 KLK1P06870 262 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 GCAP28676 217 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 CDH13P55290 713 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 SLC37A1P57057 533 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 HYAL4Q2M3T9 481 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 SGO1Q5FBB7 561 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 ADGRD1Q6QNK2 874 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 RNF111Q6ZNA4 994 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 FAM47EQ6ZV65 393 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 TRMT10CQ7L0Y3 403 aaKnown RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 SLC29A4Q7RTT9 530 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 IFT20Q8IY31 132 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 SRRM1Q8IYB3 904 aaKnown RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 METTL4Q8N3J2 472 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 CEP112Q8N8E3 955 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 SPACA9Q96E40 222 aaPredicted RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 MRPL1Q9BYD6 325 aaKnown RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 ELOVL6Q9H5J4 265 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 RYDENQ9NUL5 291 aaKnown RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
VARS-220ENST00000461874 CSMD1Q96PZ7 3565 aa17.49■□□□□ 0.39
VARS-220ENST00000461874 A0A1W2PS29 197 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 OR6C76A6NM76 312 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 IGHG3P01860 377 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 CLPSP04118 112 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 COX6B1P14854 86 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 PIK3R1P27986 724 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 PTGER4P35408 488 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 DNASE1L1P49184 302 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 EMC4Q5J8M3 183 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 SLC22A10Q63ZE4 541 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 LETMD1Q6P1Q0 360 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 PAGE2Q7Z2X7 111 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 DND1Q8IYX4 353 aaKnown RBP17.48■□□□□ 0.39
VARS-220ENST00000461874 FAM109AQ8N4B1 249 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 MARVELD2Q8N4S9 558 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 TMEM251Q8N6I4 163 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 MYRIPQ8NFW9 859 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 PAQR8Q8TEZ7 354 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 MTBPQ96DY7 904 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 GAL3ST4Q96RP7 486 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 WWTR1Q9GZV5 400 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 TP63Q9H3D4 680 aaPredicted RBP17.48■□□□□ 0.39
VARS-220ENST00000461874 CXorf21Q9HAI6 301 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 FARSBQ9NSD9 589 aaKnown RBP17.48■□□□□ 0.39
VARS-220ENST00000461874 TUBA8Q9NY65 449 aaPredicted RBP17.48■□□□□ 0.39
VARS-220ENST00000461874 DNAJC13O75165 2243 aa17.48■□□□□ 0.39
VARS-220ENST00000461874 CACNA1CQ13936 2221 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 C19orf84I3L1E1 186 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 RIPK2O43353 540 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 PDYNP01213 254 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 SNRPB2P08579 225 aaKnown RBP17.47■□□□□ 0.39
VARS-220ENST00000461874 FBXO45P0C2W1 286 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 TSPAN8P19075 237 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 TNFRSF8P28908 595 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 PIGAP37287 484 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 MAGEA5P43359 124 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 EBPQ15125 230 aaKnown RBP17.47■□□□□ 0.39
VARS-220ENST00000461874 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 CCNYL2Q5T2Q4 361 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 TMEM211Q6ICI0 200 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 OR4K14Q8NGD5 310 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 TRPC4APQ8TEL6 797 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 SDCCAG3Q96C92 435 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 ZNF225Q9UK10 706 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 SNX6Q9UNH7 406 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 SLC12A4Q9UP95 1085 aa17.47■□□□□ 0.39
VARS-220ENST00000461874 ADGRG4Q8IZF6 3080 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 A0A1B0GVC2 190 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 NPIPA2E9PIF3 369 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 NPIPA3F8WFD2 350 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 SERPINB3P29508 390 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 SSTR4P31391 388 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 HSD17B3P37058 310 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 KIR3DL1P43629 444 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 XKP51811 444 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 CLCQ05315 142 aa17.46■□□□□ 0.39
VARS-220ENST00000461874 FUT7Q11130 342 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms