RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 RAB3IL1Q8TBN0 382 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 HAS2Q92819 552 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 RIT1Q92963 219 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.14■□□□□ 0.334e-8■■■□□ 16
DDR1-241ENST00000460944 CDCP1Q9H5V8 836 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 MYNNQ9NPC7 610 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 MIEF1Q9NQG6 463 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 PLA2G3Q9NZ20 509 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 LUZP4Q9P127 313 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 UTS2RQ9UKP6 389 aa17.14■□□□□ 0.33
DDR1-241ENST00000460944 WBP11Q9Y2W2 641 aaKnown RBP17.14■□□□□ 0.33
DDR1-241ENST00000460944 OR5H15A6NDH6 313 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 LSM1O15116 133 aaKnown RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 CSNK2A2P19784 350 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 NT5EP21589 574 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 MAPK1P28482 360 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 C2orf80Q0P641 193 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 ZNF267Q14586 743 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 ATP6AP1LQ52LC2 224 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 XKR7Q5GH72 579 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 IKBIPQ70UQ0 350 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 GALNT12Q8IXK2 581 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 SUN3Q8TAQ9 357 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 THAP3Q8WTV1 239 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 C19orf60Q96EN9 201 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 SENP5Q96HI0 755 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 FBXL20Q96IG2 436 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 SORT1Q99523 831 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 UTP23Q9BRU9 249 aaKnown RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 EHD3Q9NZN3 535 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 ZNF223Q9UK11 482 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 CES1P1Q9UKY3 287 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 ENTPD4Q9Y227 616 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 CSAG2Q9Y5P2 127 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 RP1L1Q8IWN7 2480 aaPredicted RBP17.13■□□□□ 0.33
DDR1-241ENST00000460944 NBASA2RRP1 2371 aa17.13■□□□□ 0.33
DDR1-241ENST00000460944 UQCRHLA0A096LP55 91 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 TRAV17A0A0B4J275 112 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 TTLL8A6PVC2 850 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 GABRR3A8MPY1 467 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 CDK2AP1O14519 115 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 F10P00742 488 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 DDCP20711 480 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 FEN1P39748 380 aaKnown RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 MLF1P58340 268 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ERVK-8P63133 956 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ZNF169Q14929 603 aaPredicted RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 KIAA0040Q15053 153 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 PDCD2Q16342 344 aaPredicted RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 DGAT2L6Q6ZPD8 337 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 LRRC25Q8N386 305 aaPredicted RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 OR5L2Q8NGL0 311 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 OR8K3Q8NH51 312 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ZNF721Q8TF20 911 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 EXOSC8Q96B26 276 aaKnown RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 TUBGCP3Q96CW5 907 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 NPAS2Q99743 824 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 EPN3Q9H201 632 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ZNF395Q9H8N7 513 aaPredicted RBP17.12■□□□□ 0.33
DDR1-241ENST00000460944 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ERVK-19Q9WJR5 959 aa17.12■□□□□ 0.33
DDR1-241ENST00000460944 ATP6AP2A0A1C7CYW4 349 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 A0A1W2PS29 197 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 PEX11AO75192 247 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 ATP6AP2O75787 350 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 SASH3O75995 380 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 SORBS2O94875 1100 aaKnown RBP17.11■□□□□ 0.33
DDR1-241ENST00000460944 TNFSF10P50591 281 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 OC90Q02509 493 aaPredicted RBP17.11■□□□□ 0.33
DDR1-241ENST00000460944 ZNF750Q32MQ0 723 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 PLEKHN1Q494U1 663 aaPredicted RBP17.11■□□□□ 0.33
DDR1-241ENST00000460944 RNF111Q6ZNA4 994 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 HORMAD2Q8N7B1 307 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 ZNF321PQ8N8H1 164 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 FCRL1Q96LA6 429 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 C20orf27Q9GZN8 174 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 HAO1Q9UJM8 370 aa17.11■□□□□ 0.33
DDR1-241ENST00000460944 MAN1A2O60476 641 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 ITGA10O75578 1167 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 IGKV3-11P04433 115 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 ATP1B1P05026 303 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 SDC1P18827 310 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 ASMTP46597 345 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 RNF4P78317 190 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 TUBA3CQ13748 450 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 RFTN2Q52LD8 501 aaPredicted RBP17.1■□□□□ 0.33
DDR1-241ENST00000460944 FAM71E1Q6IPT2 247 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 TUBA3EQ6PEY2 450 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 SLC29A4Q7RTT9 530 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 TICAM1Q8IUC6 712 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 ARMC10Q8N2F6 343 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 Q8NA96 180 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 CATSPER1Q8NEC5 780 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 DOK4Q8TEW6 326 aa17.1■□□□□ 0.33
DDR1-241ENST00000460944 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms