RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CLDN4O14493 209 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 AZIN1O14977 448 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 PRMT3O60678 531 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 DNAJB6O75190 326 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 CHEK2O96017 543 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 HPP00738 406 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 GRK2P25098 689 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 HSD17B7P56937 341 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 ABRAXAS2Q15018 415 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 ARL13AQ5H913 290 aaPredicted RBP10.41□□□□□ -0.74
APTX-209ENST00000460940 TCHHL1Q5QJ38 904 aaPredicted RBP10.41□□□□□ -0.74
APTX-209ENST00000460940 DCAF10Q5QP82 559 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 TMEM151BQ8IW70 566 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 CLEC1AQ8NC01 280 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 RBM15BQ8NDT2 890 aaKnown RBP10.41□□□□□ -0.74
APTX-209ENST00000460940 KCNA7Q96RP8 456 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 ACPTQ9BZG2 426 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 ING2Q9H160 280 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 MANSC1Q9H8J5 431 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 RIC8BQ9NVN3 520 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 KCMF1Q9P0J7 381 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 TIMM22Q9Y584 194 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 SPTA1P02549 2419 aa10.41□□□□□ -0.74
APTX-209ENST00000460940 TLN1Q9Y490 2541 aaKnown RBP10.41□□□□□ -0.74
APTX-209ENST00000460940 IGKV3D-11A0A0A0MRZ8 115 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CCDC160A6NGH7 325 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CYR61O00622 381 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 KLHL41O60662 606 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 B4GALT2O60909 372 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CDC123O75794 336 aaPredicted RBP10.4□□□□□ -0.74
APTX-209ENST00000460940 FGF4P08620 206 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 SFTPCP11686 197 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 COX6A1P12074 109 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 ZNF12P17014 697 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 S100A1P23297 94 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 HTR6P50406 440 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 EFNA3P52797 238 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 FOXA1P55317 472 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 TNFRSF17Q02223 184 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 FOLH1Q04609 750 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 AIMP2Q13155 320 aaKnown RBP10.4□□□□□ -0.74
APTX-209ENST00000460940 SLAMF1Q13291 335 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 NSDHLQ15738 373 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 INAQ16352 499 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 SPIN4Q56A73 249 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 OGFRL1Q5TC84 451 aaPredicted RBP10.4□□□□□ -0.74
APTX-209ENST00000460940 KANK2Q63ZY3 851 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CPZQ66K79 652 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CYP20A1Q6UW02 462 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 ZCCHC23Q6ZST2 131 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 NDUFAF7Q7L592 441 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 COMMD6Q7Z4G1 85 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 TRIM46Q7Z4K8 759 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 GPR180Q86V85 440 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 FAM47BQ8NA70 645 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 SORBS1Q9BX66 1292 aaKnown RBP10.4□□□□□ -0.74
APTX-209ENST00000460940 MRPL1Q9BYD6 325 aaKnown RBP10.4□□□□□ -0.74
APTX-209ENST00000460940 ZNF700Q9H0M5 742 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 SCN3AQ9NY46 2000 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 RABL2BQ9UNT1 228 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 CEPT1Q9Y6K0 416 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 PIEZO2Q9H5I5 2752 aa10.4□□□□□ -0.74
APTX-209ENST00000460940 IGHV1-45A0A0A0MS14 117 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 NSG1A0A0A6YYJ2 146 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 FBP2O00757 339 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 KLF11O14901 512 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 GUCY1B2O75343 617 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 CHRNGP07510 517 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 NAT2P11245 290 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 CDH2P19022 906 aaPredicted RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 CPN2P22792 545 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 PPP2R1BP30154 601 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 TLX1P31314 330 aaPredicted RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 BUD31P41223 144 aaPredicted RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 CDK9P50750 372 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 SOX8P57073 446 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 EEF1A2Q05639 463 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 CHI3L2Q15782 390 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 IMPG1Q17R60 797 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 LINC00303Q3SY05 128 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 CPEB2Q7Z5Q1 589 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 ANKRD37Q7Z713 158 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 EFCAB3Q8N7B9 438 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 RAB3IL1Q8TBN0 382 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 METTL2AQ96IZ6 378 aaKnown RBP10.4□□□□□ -0.75
APTX-209ENST00000460940 PTCHD1Q96NR3 888 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 CSF3RQ99062 836 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 HBEGFQ99075 208 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 MAPKAP1Q9BPZ7 522 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 SHCBP1LQ9BZQ2 653 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 TNFRSF12AQ9NP84 129 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 ATP13A2Q9NQ11 1180 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 PRTFDC1Q9NRG1 225 aa10.4□□□□□ -0.75
APTX-209ENST00000460940 NBEAQ8NFP9 2946 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 TCRBV16S1A1N1A0A5B0 115 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 WDR91A4D1P6 747 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 FAM227AF5H4B4 570 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms