RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NPFFR2Q9Y5X5 522 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PIP5K1BO14986 540 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ALDOAP04075 364 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ETS2P15036 469 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PRKCAP17252 672 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CDH12P55289 794 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DEFB106AQ8N104 65 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 NXPE1Q8N323 547 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR2AP1Q8NGE2 309 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR56A3Q8NH54 315 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ORAI3Q9BRQ5 295 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM106CQ9BVX2 250 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 BPNT1O95861 308 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ITGA3P26006 1051 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLC6A8P48029 635 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CLK2P49760 499 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 STC1P52823 247 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CHRFAM7AQ494W8 412 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 UBE2NLQ5JXB2 153 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 AGAP7PQ5VUJ5 663 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZFP90Q8TF47 636 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SENP8Q96LD8 212 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLC35A5Q9BS91 424 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SMDT1Q9H4I9 107 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MRPL17Q9NRX2 175 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ADARB2Q9NS39 739 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ABHD14A-ACY1A0A1B0GW23 586 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 FOXO6A8MYZ6 492 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CPNE3O75131 537 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RECQL4O94761 1208 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CD1EP15812 388 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CDH8P55286 799 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ITPK1Q13572 414 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RAB39AQ14964 217 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 HLFQ16534 295 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SMARCD3Q6STE5 483 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DGLUCYQ7Z3D6 616 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLC22A16Q86VW1 577 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SYT14Q8NB59 555 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 GORASP2Q9H8Y8 452 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DBNDD1Q9H9R9 158 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TDP1Q9NUW8 608 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RBFOX1Q9NWB1 397 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 EVLQ9UI08 416 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLCO3A1Q9UIG8 710 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF236Q9UL36 1845 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 HMX3A6NHT5 357 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PCDH8O95206 1070 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CTSEP14091 401 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SCAND1P57086 179 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 BAMBIQ13145 260 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DUSP7Q16829 419 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 NHLRC2Q8NBF2 726 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 STEAP2Q8NFT2 490 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CHTF18Q8WVB6 975 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MSI2Q96DH6 328 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 LIN37Q96GY3 246 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TBL1XR1Q9BZK7 514 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ARL6Q9H0F7 186 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SOX17Q9H6I2 414 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 BLOC1S4Q9NUP1 217 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ASF1AQ9Y294 204 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CXorf51AA0A1B0GTR3 108 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF726A6NNF4 738 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 B4GALT5O43286 388 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF623O75123 536 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 UBL3O95164 117 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 FOXN2P32314 431 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 THPOP40225 353 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 LEPRP48357 1165 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM41BQ5BJD5 291 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 C11orf96Q7Z7L8 435 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 LILRB4Q8NHJ6 448 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TSGA13Q96PP4 275 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CHST7Q9NS84 486 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 A0A0G2JN53 185 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SGCEO43556 437 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 AP1G1O43747 822 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ELK1P19419 428 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RAB5AP20339 215 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 VAMP1P23763 118 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ETV4P43268 484 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 HSPA7P48741 367 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 C1QTNF8P60827 252 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CDC20Q12834 499 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 GINS1Q14691 196 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PPA1Q15181 289 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 VRK3Q8IV63 474 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR6V1Q8N148 313 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR7G3Q8NG95 312 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 OR5L2Q8NGL0 311 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 DUSP19Q8WTR2 217 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 B3GNT5Q9BYG0 378 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RSPH9Q9H1X1 276 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 COQ10BQ9H8M1 238 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 KCNK13Q9HB14 408 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 A8MVM7 634 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 E5RGE8 158 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MAGEB4O15481 346 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms