RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 KIAA0408Q6ZU52 694 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MILR1Q7Z6M3 343 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 GALNT7Q86SF2 657 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 OR4N5Q8IXE1 308 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 GHDCQ8N2G8 530 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 RPRMLQ8N4K4 120 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MARVELD2Q8N4S9 558 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TBC1D19Q8N5T2 526 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TMEM156Q8N614 296 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 HORMAD2Q8N7B1 307 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM47BQ8NA70 645 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM98AQ8NCA5 519 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 APCDD1LQ8NCL9 501 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 FBXO36Q8NEA4 188 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TRPV3Q8NET8 790 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 B3GNT7Q8NFL0 401 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 GABPB2Q8TAK5 448 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 UHMK1Q8TAS1 419 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ATL1Q8WXF7 558 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SLCO2A1Q92959 643 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 NCLNQ969V3 563 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TMEM125Q96AQ2 219 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SDCCAG3Q96C92 435 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 RHBDF1Q96CC6 855 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MTFMTQ96DP5 389 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 MAGED4Q96JG8 741 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PDLIM2Q96JY6 352 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 FAR2Q96K12 515 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 LURAP1Q96LR2 239 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 F2RL3Q96RI0 385 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 NAT9Q9BTE0 207 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM129AQ9BZQ8 928 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TRIM8Q9BZR9 551 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 UCK2Q9BZX2 261 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 DPH5Q9H2P9 285 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PELI2Q9HAT8 420 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 EMC7Q9NPA0 242 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CHST11Q9NPF2 352 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PRTFDC1Q9NRG1 225 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 DEPPQ9NTK1 212 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 OXSMQ9NWU1 459 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 KCMF1Q9P0J7 381 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 CTNNAL1Q9UBT7 734 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 OARD1Q9Y530 152 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 PCDHGB6Q9Y5F9 930 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 F8P00451 2351 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 UNC79Q9P2D8 2635 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 TEX15Q9BXT5 2789 aa4.36□□□□□ -1.71
GTF3C3-208ENST00000455546 ABCA12Q86UK0 2595 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TEP1Q99973 2627 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CELSR2Q9HCU4 2923 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A0G2JMM0 328 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A1W2PPB8 328 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A1W2PRS3 328 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 NKX2-6A6NCS4 301 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PRAMEF25A6NGN4 478 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKDD1BA6NHY2 528 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TMEM200CA6NKL6 621 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 WASHC1A8K0Z3 465 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM166BA8MTA8 275 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 EFCAB8A8MWE9 144 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 KIR3DP1A8MWS1 328 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 NPIPA2E9PIF3 369 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 NPIPA3F8WFD2 350 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 KLRC4-KLRK1H3BQV0 150 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SAP18O00422 153 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 RTCAO00442 366 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CYR61O00622 381 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CES2O00748 559 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CLDN4O14493 209 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 FCHO1O14526 889 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PRRG2O14669 202 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TFECO14948 347 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ZSCAN12O43309 604 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 B3GALT2O43825 422 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CCNT2O60583 730 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF354AO60765 605 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM155BO75949 473 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SEC31AO94979 1220 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 OR6B1O95007 311 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 WISP3O95389 354 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 MLYCDO95822 493 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 IFNA16P05015 189 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TPOP07202 933 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CCDC166P0CW27 439 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF24P17028 368 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TCP1P17987 556 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 GNAZP19086 355 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TNNI3P19429 210 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TFEBP19484 476 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CD22P20273 847 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CERS1P27544 350 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PTGS2P35354 604 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC6A12P48065 614 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SMSP52788 366 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms