RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 SPSB2Q99619 263 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 CADM1Q9BY67 442 aaKnown RBP15.62■□□□□ 0.09
LINC00963-208ENST00000454968 FAM117AQ9C073 453 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 MMADHCQ9H3L0 296 aaPredicted RBP15.62■□□□□ 0.09
LINC00963-208ENST00000454968 NANOGQ9H9S0 305 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 POLR1BQ9H9Y6 1135 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 GIMAP4Q9NUV9 329 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 ACSL6Q9UKU0 697 aa15.62■□□□□ 0.09
LINC00963-208ENST00000454968 PRPF19Q9UMS4 504 aaKnown RBP15.62■□□□□ 0.09
LINC00963-208ENST00000454968 CDRT15L2A8MXV6 281 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 GYG2O15488 501 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 DXOO77932 396 aaKnown RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 KLK3P07288 261 aaPredicted RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 ABCB1P08183 1280 aaPredicted RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 ZGLP1P0C6A0 271 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 EFNA1P20827 205 aaPredicted RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 AGXTP21549 392 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 FEN1P39748 380 aaKnown RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 MANFP55145 182 aaKnown RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 BTG2P78543 158 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 MGAT2Q10469 447 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SERTAD2Q14140 314 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 ERV3-1Q14264 604 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SPATS1Q496A3 300 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 GTDC1Q4AE62 458 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 ZNF628Q5EBL2 1059 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 TMEM164Q5U3C3 297 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 OR4N5Q8IXE1 308 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SLC15A3Q8IY34 581 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 CCDC116Q8IYX3 515 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 DEFB107AQ8IZN7 70 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 ZFP90Q8TF47 636 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 TMEM125Q96AQ2 219 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SLC46A1Q96NT5 459 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 BBS4Q96RK4 519 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 CPPED1Q9BRF8 314 aaPredicted RBP15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SLC39A3Q9BRY0 314 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 RBCK1Q9BYM8 510 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 CXorf36Q9H7Y0 433 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 SPAG4Q9NPE6 437 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 NECTIN3Q9NQS3 549 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 PCDHGB4Q9UN71 923 aa15.61■□□□□ 0.09
LINC00963-208ENST00000454968 TCRBV16S1A1N1A0A5B0 115 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 B4GALT2O60909 372 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 DNAJC8O75937 253 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 C8orf89P0DMQ9 161 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 GPX2P18283 190 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 STT3AP46977 705 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CDK9P50750 372 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 NCBP2P52298 156 aaKnown RBP eCLIP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MVDP53602 400 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CAMK2BQ13554 666 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CAPRIN1Q14444 709 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 FXNQ16595 210 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PRICKLE4Q2TBC4 344 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 FHL5Q5TD97 284 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 ZNF771Q7L3S4 317 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 TIPARPQ7Z3E1 657 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 OR4A15Q8NGL6 344 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 SFXN5Q8TD22 340 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 UTP4Q969X6 686 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PELOQ9BRX2 385 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 VN1R1Q9GZP7 353 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 IKZF5Q9H5V7 419 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 GPATCH2Q9NW75 528 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 FOXJ2Q9P0K8 574 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 IFT80Q9P2H3 777 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CD300AQ9UGN4 299 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 ZNF639Q9UID6 485 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 NXT1Q9UKK6 140 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 VPS4AQ9UN37 437 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 SPTBN4Q9H254 2564 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 A0A087WV62 115 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 FAM149AA5PLN7 773 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 TERTO14746 1132 aaKnown RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PLOD3O60568 738 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PSMG1O95456 288 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MAOAP21397 527 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 UQCRC2P22695 453 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MAGEA8P43361 318 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MXRA7P84157 204 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PLIN5Q00G26 463 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 VAC14Q08AM6 782 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MAP4K2Q12851 820 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 SLC13A2Q13183 592 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 PIGGQ5H8A4 983 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 SAXO2Q658L1 398 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 DNAJC14Q6Y2X3 702 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-208ENST00000454968 LAPTM4BQ86VI4 370 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 TRIML2Q8N7C3 387 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 GALNT6Q8NCL4 622 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 ELP4Q96EB1 424 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 NEURL3Q96EH8 262 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 ALOXE3Q9BYJ1 711 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CHST8Q9H2A9 424 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 IL1RL2Q9HB29 575 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 ASCL3Q9NQ33 180 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 CMTM6Q9NX76 183 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 MAT2BQ9NZL9 334 aa15.6■□□□□ 0.09
LINC00963-208ENST00000454968 AP3M1Q9Y2T2 418 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms