RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BBS4Q96RK4 519 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 EFHD1Q9BUP0 239 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 YIPF2Q9BWQ6 316 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ALOXE3Q9BYJ1 711 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 RBCK1Q9BYM8 510 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ARL8BQ9NVJ2 186 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 TAS2R9Q9NYW1 312 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MAP10Q9P2G4 905 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 CROTQ9UKG9 612 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 TCFL5Q9UL49 500 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ERVK-11Q9UQG0 969 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 FARSAQ9Y285 508 aaKnown RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 A0A087WV62 115 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 A0A096LPI6 279 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 LOC100653049A0A140TA62 436 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 LOC101059948A0A1B0GTJ6 334 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 A0A1W2PS29 197 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 EBAG9O00559 213 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PLOD3O60568 738 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 CDC123O75794 336 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 KRT34O76011 436 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 UBOX5O94941 541 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 HEXBP07686 556 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 C8orf89P0DMQ9 161 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 MAOAP21397 527 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 MMP11P24347 488 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SOX18P35713 384 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 FOLR3P41439 243 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 HBA1P69905 142 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 BNIP1Q12981 228 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SSPNQ14714 243 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 ELAVL1Q15717 326 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 NSDHLQ15738 373 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PRICKLE4Q2TBC4 344 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 ZNF628Q5EBL2 1059 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 REP15Q6BDI9 236 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 DLEU7Q6UYE1 221 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 OR4N5Q8IXE1 308 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PCYOX1LQ8NBM8 494 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 TSLPQ969D9 159 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 MOAP1Q96BY2 351 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 RBM18Q96H35 190 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 NSL1Q96IY1 281 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 CRB3Q9BUF7 120 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PAIP1Q9H074 479 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SOX17Q9H6I2 414 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 EFCAB1Q9HAE3 211 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 CXorf21Q9HAI6 301 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 ADAP2Q9NPF8 381 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SIRT3Q9NTG7 399 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 ZNF639Q9UID6 485 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 SSUH2Q9Y2M2 353 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 PTRH2Q9Y3E5 179 aaKnown RBP10.53□□□□□ -0.72
TRAF4-206ENST00000454852 AHCTF1Q8WYP5 2266 aa10.53□□□□□ -0.72
TRAF4-206ENST00000454852 OR2W5A6NFC9 320 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 FXYD1O00168 92 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 ATP5HO75947 161 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 KCNH1O95259 989 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 PSMG1O95456 288 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 C6orf47O95873 294 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 CAPNS1P04632 268 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 F8A1P23610 371 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 DLSTP36957 453 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 FEN1P39748 380 aaKnown RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 MAGEA8P43361 318 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 NCBP2P52298 156 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 FUT7Q11130 342 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 ZNF750Q32MQ0 723 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 TRMT5Q32P41 509 aaKnown RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 FHL5Q5TD97 284 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 ANKRD37Q7Z713 158 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 YTHDF3Q7Z739 585 aaKnown RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 CCDC116Q8IYX3 515 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 CLECL1Q8IZS7 167 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 OR2L13Q8N349 312 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 POU5F2Q8N7G0 328 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 OR14A16Q8NHC5 309 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 PTPMT1Q8WUK0 201 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-206ENST00000454852 METTL21AQ8WXB1 218 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 FGF11Q92914 225 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 RNF31Q96EP0 1072 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 DGAT2Q96PD7 388 aa10.52□□□□□ -0.73
TRAF4-206ENST00000454852 PANX1Q96RD7 426 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms