RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RGS14O43566 566 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 OR10H2O60403 315 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 NEURL1O76050 574 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 CHEK2O96017 543 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 CT62P0C5K7 136 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 PIK3R1P27986 724 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 HK2P52789 917 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 ERVK-8P63133 956 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 DUSP2Q05923 314 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 FUT7Q11130 342 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 FAM71E1Q6IPT2 247 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 GALNT12Q8IXK2 581 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 PPWD1Q96BP3 646 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SNRNP40Q96DI7 357 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 RBM18Q96H35 190 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SENP5Q96HI0 755 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SIGLEC12Q96PQ1 595 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SORT1Q99523 831 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 LRTM1Q9HBL6 345 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 C1orf109Q9NX04 203 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 MYOTQ9UBF9 498 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 COPS7AQ9UBW8 275 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 EXO1Q9UQ84 846 aaKnown RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 ERVK-19Q9WJR5 959 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 FIS1Q9Y3D6 152 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 POLR3HQ9Y535 204 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-205ENST00000454542 CNTRLQ7Z7A1 2325 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 GCN1Q92616 2671 aaKnown RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 GNG14A0A1W2PPG7 69 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 OR6C76A6NM76 312 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 FCHO1O14526 889 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ITM2AO43736 263 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 DYRK3O43781 588 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ITGA10O75578 1167 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 F10P00742 488 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ANXA4P09525 319 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 PORP16435 677 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 TNNI3P19429 210 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 DDCP20711 480 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 BGNP21810 368 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 GRK2P25098 689 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 CD96P40200 585 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 HLCSP50747 726 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 XKP51811 444 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 SLC37A1P57057 533 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ABCE1P61221 599 aaKnown RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 RNF4P78317 190 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 BTKQ06187 659 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 MGAT2Q10469 447 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 HEPACAMQ14CZ8 416 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 NR6A1Q15406 480 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 OR1C1Q15619 314 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 PRICKLE4Q2TBC4 344 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF750Q32MQ0 723 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 NOXRED1Q6NXP6 359 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF441Q8N8Z8 693 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF675Q8TD23 568 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 RIT1Q92963 219 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 CTHRC1Q96CG8 243 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 KLHL29Q96CT2 875 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 CCT7Q99832 543 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 C20orf27Q9GZN8 174 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ARGLU1Q9NWB6 273 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-205ENST00000454542 MAT2BQ9NZL9 334 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF639Q9UID6 485 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 TMED5Q9Y3A6 229 aa13.15□□□□□ -0.3
HDAC4-205ENST00000454542 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 WISP1O95388 367 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 NADKO95544 446 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 SDC1P18827 310 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 CSNK2A2P19784 350 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 S1PR1P21453 382 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 TACR1P25103 407 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 RPL38P63173 70 aaKnown RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 MPEG1Q2M385 716 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 TTMPQ5BVD1 217 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 GPALPP1Q8IXQ4 340 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF781Q8N8C0 355 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 SUN3Q8TAQ9 357 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms