RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CEACAM8P31997 349 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZNF136P52737 540 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 PPP2R2AP63151 447 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 PCDH1Q08174 1060 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DLG1Q12959 904 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DUSP8Q13202 625 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 HSPB2Q16082 182 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 NTRK2Q16620 822 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 HIST2H2ACQ16777 129 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SPRED3Q2MJR0 410 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 FBXL19-AS1Q494R0 122 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DEPDC1Q5TB30 811 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 BICRALQ6AI39 1079 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 HIST2H2AA3Q6FI13 130 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 OR4C11Q6IEV9 310 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 GPR180Q86V85 440 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ST13P4Q8IZP2 240 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZNF441Q8N8Z8 693 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 HUS1BQ8NHY5 278 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 UBTD2Q8WUN7 234 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 CMTM7Q96FZ5 175 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 JSRP1Q96MG2 331 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ALPK1Q96QP1 1244 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ATOH8Q96SQ7 321 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 KRT12Q99456 494 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DOHHQ9BU89 302 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ALG9Q9H6U8 611 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 QPCTLQ9NXS2 382 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 NUDT4Q9NZJ9 180 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 CNIH4Q9P003 139 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RPH3AQ9Y2J0 694 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 C15orf38-AP3S2A0A0A6YYH1 394 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TCRBV9S1A1TA0A576 114 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 FAM159BA6NKW6 160 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 EFCAB8A8MWE9 144 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 K7EPI3 171 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 UBXN8O00124 270 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DVL2O14641 736 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TMPRSS11DO60235 418 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 EEDO75530 441 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 EPPINO95925 133 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 S100BP04271 92 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SLC35E2BP0CK96 405 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DNASE1P24855 282 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TACR1P25103 407 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 GDF1P27539 372 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SERPINB1P30740 379 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RAB10P61026 200 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ADAM8P78325 824 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 MRPS25P82663 173 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TBL3Q12788 808 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ILF2Q12905 390 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DDX39BQ13838 428 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZNF267Q14586 743 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DCST1Q5T197 706 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 FNDC7Q5VTL7 733 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 MRM1Q6IN84 353 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 GRHL2Q6ISB3 625 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 PAMR1Q6UXH9 720 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TMEM64Q6YI46 380 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RNF111Q6ZNA4 994 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SLC29A4Q7RTT9 530 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 CMC1Q7Z7K0 106 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ISCA2Q86U28 154 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 DND1Q8IYX4 353 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZCCHC7Q8N3Z6 543 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 LIX1Q8N485 282 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 FAM222BQ8WU58 562 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TANKQ92844 425 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RNASE6Q93091 150 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 UCN3Q969E3 161 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 UBE2E3Q969T4 207 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RGMAQ96B86 450 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 RBM18Q96H35 190 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ART5Q96L15 291 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 MTERF1Q99551 399 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 TIMP4Q99727 224 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 CPNE1Q99829 537 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 UBQLN3Q9H347 655 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 MS4A12Q9NXJ0 267 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 PHF11Q9UIL8 331 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 SNX24Q9Y343 169 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 ASB4Q9Y574 426 aa8.1□□□□□ -1.11
DEPDC1B-202ENST00000453022 A0A0A6YYD5 115 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 IQANK1A0A1B0GTG1 560 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 A0A1W2PR48 441 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 GLOD5A6NK44 160 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 AHRRA9YTQ3 701 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 SUPT3HB4E1H0 165 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 DYRK3O43781 588 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 KERAO60938 352 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 SUPT3HO75486 399 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 FAM155BO75949 473 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 GPR75O95800 540 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 MTHFD2P13995 350 aa8.09□□□□□ -1.11
DEPDC1B-202ENST00000453022 SERPINB3P29508 390 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms