RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TIMMDC1Q9NPL8 285 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 HPF1Q9NWY4 346 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 ENTPD4Q9Y227 616 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 MYOCOSA0A1B0GUC4 107 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 SAP18O00422 153 aaKnown RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 ASNA1O43681 348 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 CTNSO60931 367 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 LYPLA1O75608 230 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 DCTN3O75935 186 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 SUPT7LO94864 414 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 CD22P20273 847 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 TRHRP34981 398 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 HNRNPFP52597 415 aaKnown RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 HSDL2Q6YN16 418 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 SPPL2CQ8IUH8 684 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 TMEM52Q8NDY8 209 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 C7orf57Q8NEG2 295 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 OR14A16Q8NHC5 309 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 REPS1Q96D71 796 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 MS4A8Q9BY19 250 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 OR8D2Q9GZM6 311 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 GSTO2Q9H4Y5 243 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF395Q9H8N7 513 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 ACTR8Q9H981 624 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 COPS7AQ9UBW8 275 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 ADGRE2Q9UHX3 823 aa20.14■□□□□ 0.81
C9orf3-208ENST00000451893 YARS2Q9Y2Z4 477 aaKnown RBP20.14■□□□□ 0.81
C9orf3-208ENST00000451893 RTCAO00442 366 aaKnown RBP20.13■□□□□ 0.81
C9orf3-208ENST00000451893 PRRG2O14669 202 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 CDC40O60508 579 aaKnown RBP eCLIP20.13■□□□□ 0.81
C9orf3-208ENST00000451893 FGF4P08620 206 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 RPS17P08708 135 aaKnown RBP20.13■□□□□ 0.81
C9orf3-208ENST00000451893 ART3Q13508 389 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 C6orf89Q6UWU4 347 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 GBP7Q8N8V2 638 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-208ENST00000451893 ACOT4Q8N9L9 421 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 UBTD2Q8WUN7 234 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 ITLN2Q8WWU7 325 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-208ENST00000451893 ASB1Q9Y576 335 aa20.13■□□□□ 0.81
C9orf3-208ENST00000451893 GTF3C1Q12789 2109 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 A0A0G2JND7 137 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 HDAC3O15379 428 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PEX1O43933 1283 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PRAMEF4O60810 478 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 LDB3O75112 727 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 HIST1H1TP22492 207 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-208ENST00000451893 ATP5A1P25705 553 aaKnown RBP20.12■□□□□ 0.81
C9orf3-208ENST00000451893 TLX1P31314 330 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-208ENST00000451893 ARRB2P32121 409 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PIK3CGP48736 1102 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PLGLB1Q02325 96 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 LCP2Q13094 533 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PRAMEF9Q5VWM5 478 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 GRHL2Q6ISB3 625 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 SULF2Q8IWU5 870 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 MORN4Q8NDC4 146 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 OR7G3Q8NG95 312 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 RFWD2Q8NHY2 731 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF483Q8TF39 744 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-208ENST00000451893 ATP6V1E2Q96A05 226 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 RGMAQ96B86 450 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 DGAT2Q96PD7 388 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 MAPKAP1Q9BPZ7 522 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 PRDM7Q9NQW5 492 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 KCMF1Q9P0J7 381 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 DCTN4Q9UJW0 460 aa20.12■□□□□ 0.81
C9orf3-208ENST00000451893 NOTCH2Q04721 2471 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 CCT8L1PA6NM43 557 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 C17orf105B2RV13 164 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 CYR61O00622 381 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 RFC3P40938 356 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 CASP2P42575 452 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 AQP5P55064 265 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 GPR85P60893 370 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 HSF1Q00613 529 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 CLCQ05315 142 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 KHDRBS2Q5VWX1 349 aaKnown RBP20.11■□□□□ 0.81
C9orf3-208ENST00000451893 XKRXQ6PP77 449 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 IL20RBQ6UXL0 311 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 YTHDF3Q7Z739 585 aaKnown RBP20.11■□□□□ 0.81
C9orf3-208ENST00000451893 GPALPP1Q8IXQ4 340 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 LAS2Q8IYD9 372 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF781Q8N8C0 355 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 OR5L2Q8NGL0 311 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 TMEM120AQ9BXJ8 343 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 OR51B5Q9H339 312 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 TRIM45Q9H8W5 580 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-208ENST00000451893 LIN28AQ9H9Z2 209 aaKnown RBP20.11■□□□□ 0.81
C9orf3-208ENST00000451893 CHST11Q9NPF2 352 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 PNPOQ9NVS9 261 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 MS4A12Q9NXJ0 267 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 PHF11Q9UIL8 331 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 PCDHGA11Q9Y5H2 935 aa20.11■□□□□ 0.81
C9orf3-208ENST00000451893 KLF2Q9Y5W3 355 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-208ENST00000451893 TRPC5OSA6NMA1 111 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 TGFBR3LH3BV60 316 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 ACOT7O00154 380 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 WWP2O00308 870 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 OR2J2O76002 312 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 TBX6O95947 436 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms