RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DDX31Q9H8H2 851 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 MOB1AQ9H8S9 216 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SEMA4BQ9NPR2 832 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 CISHQ9NSE2 258 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 AIG1Q9NVV5 245 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SOHLH2Q9NX45 425 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 POMT2Q9UKY4 750 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 BCS1LQ9Y276 419 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC27A5Q9Y2P5 690 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ARFGEF2Q9Y6D5 1785 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TCAF2A6NFQ2 919 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HMSDA8MTL9 139 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 B4DXG7 233 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC7A4O43246 635 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CYTIPO60759 359 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RBBP9O75884 186 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SPDEFO95238 335 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MT-CYBP00156 380 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 FGF1P05230 155 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CTSHP09668 335 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CBSLP0DN79 551 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GALP22466 123 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ITGA3P26006 1051 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NOS3P29474 1203 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CDH5P33151 784 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CBSP35520 551 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TAGLN2P37802 199 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 GNALP38405 381 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ALDH3B1P43353 468 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HCAR3P49019 387 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DGKGP49619 791 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KHKP50053 298 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MLLT10P55197 1068 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TAS2R50P59544 299 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SEC61A1P61619 476 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 RAP1AP62834 184 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GPLD1P80108 840 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GBE1Q04446 702 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF91Q05481 1191 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ACSM1Q08AH1 577 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC10A7Q0GE19 358 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RAB40BQ12829 278 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF460Q14592 562 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PPA1Q15181 289 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RBMS2Q15434 407 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 IL17AQ16552 155 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ACTBL2Q562R1 376 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TSTD2Q5T7W7 516 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR7E24Q6IFN5 339 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HEPHL1Q6MZM0 1159 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 INTS5Q6P9B9 1019 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MOB1BQ7L9L4 216 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PIWIL3Q7Z3Z3 882 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SZRD1Q7Z422 152 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DCXRQ7Z4W1 244 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FJX1Q86VR8 437 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 JAZF1Q86VZ6 243 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 UNC93AQ86WB7 457 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZFAND4Q86XD8 727 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TRAPPC5Q8IUR0 188 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 APOBEC3FQ8IUX4 373 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 KLHDC8BQ8IXV7 354 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PLPP6Q8IY26 295 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 POMGNT2Q8NAT1 580 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 B3GNT7Q8NFL0 401 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR52E4Q8NGH9 312 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 BRIX1Q8TDN6 353 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CXorf40AQ8TE69 158 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PHYHIPQ92561 330 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 EDEM1Q92611 657 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NTAN1Q96AB6 310 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TBC1D20Q96BZ9 403 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CXorf40BQ96DE9 158 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LRCH3Q96II8 777 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OMDQ99983 421 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MXRA8Q9BRK3 442 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TMEM43Q9BTV4 400 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR11A1Q9GZK7 315 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C11orf54Q9H0W9 315 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2AG1Q9H205 316 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NELFAQ9H3P2 528 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 EPHA6Q9UF33 1036 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CA14Q9ULX7 337 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ASF1AQ9Y294 204 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 VWA7Q9Y334 891 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 COQ4Q9Y3A0 265 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KCTD3Q9Y597 815 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PCDHGA6Q9Y5G7 932 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ETV7Q9Y603 341 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SPACA6W5XKT8 324 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DAPL1A0PJW8 107 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C7orf72A4D263 438 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 USP17L3A6NCW0 530 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TCP10L2B9ZVM9 353 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARNTLO00327 626 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CYB561D2O14569 222 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARPC5O15511 151 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 B4GAT1O43505 415 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LATO43561 262 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 UGDHO60701 494 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms