RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 FGFBP1Q14512 234 aa13.33□□□□□ -0.27
ITGB4-202ENST00000449880 ZNF527Q8NB42 609 aa13.33□□□□□ -0.27
ITGB4-202ENST00000449880 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.27
ITGB4-202ENST00000449880 OR14K1Q8NGZ2 314 aa13.33□□□□□ -0.27
ITGB4-202ENST00000449880 C1orf74Q96LT6 269 aa13.33□□□□□ -0.27
ITGB4-202ENST00000449880 DNAJC25-GNG10A0A024R161 153 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 C2orf74A8MZ97 194 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 IFNA2P01563 188 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ZNF30P17039 623 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 SGCBQ16585 318 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 AMZ1Q400G9 498 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 C2orf27AQ580R0 203 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 OR2M2Q96R28 347 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 TBL1XR1Q9BZK7 514 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CCDC86Q9H6F5 360 aaKnown RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 NIPAL2Q9H841 368 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 YIPF1Q9Y548 306 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 DNAJC15Q9Y5T4 150 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 HS3ST4Q9Y661 456 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 KLK1P06870 262 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 RPL35P42766 123 aaKnown RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 MAN2A2P49641 1150 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 HK3P52790 923 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 TLE2Q04725 743 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 METTL2BQ6P1Q9 378 aaKnown RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 TICAM1Q8IUC6 712 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 PARP16Q8N5Y8 322 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 HAVCR2Q8TDQ0 301 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 SCLYQ96I15 445 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ZBTB20Q9HC78 741 aaPredicted RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 LAMB1P07942 1786 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ARAP2Q8WZ64 1704 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 HSPA12AO43301 675 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 PLGP00747 810 aaPredicted RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 GDI1P31150 447 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 RGS19P49795 217 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 OC90Q02509 493 aaPredicted RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 GXYLT1Q4G148 440 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 BCL2L15Q5TBC7 163 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ADAMTS16Q8TE57 1224 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 KLK6Q92876 244 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ARNTLO00327 626 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 TNFP01375 233 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 BCKDHAP12694 445 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 FGL2Q14314 439 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 MAPK14Q16539 360 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 SLC2A13Q96QE2 648 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 OR51J1Q9H342 316 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
ITGB4-202ENST00000449880 FARSAQ9Y285 508 aaKnown RBP13.33□□□□□ -0.28
ITGB4-202ENST00000449880 ANKRD66B4E2M5 251 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 KDELR3O43731 214 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 S1PR4O95977 384 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 UCHL1P09936 223 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ADH5P11766 374 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 CERS1P27544 350 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 GGT2P36268 569 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ACTBP60709 375 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ACTG1P63261 375 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 SPCS2Q15005 226 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 RPS27LQ71UM5 84 aaKnown RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 PIWIL3Q7Z3Z3 882 aaKnown RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ZNF584Q8IVC4 421 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 FAM110BQ8TC76 370 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 SMPDL3BQ92485 455 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 NR2C1P13056 603 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 OSMP13725 252 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 CPOXP36551 454 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 DHPSP49366 369 aaPredicted RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ETV1P50549 477 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 SCAPQ12770 1279 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 KCTD9Q7L273 389 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 IMP4Q96G21 291 aaKnown RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ARL5BQ96KC2 179 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 SYT11Q9BT88 431 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 NSUN3Q9H649 340 aaKnown RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 TTC24A2A3L6 582 aaPredicted RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ACP5P13686 325 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 RBMXP38159 391 aaKnown RBP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 APOFQ13790 326 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 MICAQ29983 383 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.32□□□□□ -0.28
ITGB4-202ENST00000449880 EOGTQ5NDL2 527 aa13.32□□□□□ -0.28
ITGB4-202ENST00000449880 PLAG1Q6DJT9 500 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms