RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 TYROBPO43914 113 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 MAN1A2O60476 641 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 CHEK2O96017 543 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 TNFSF10P50591 281 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 IGLV3-21P80748 117 aaPredicted RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 BTKQ06187 659 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 SPDYAQ5MJ70 313 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 C6orf163Q5TEZ5 329 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 CLEC6AQ6EIG7 209 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 H3F3CQ6NXT2 135 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 ZCCHC23Q6ZST2 131 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 RPS19BP1Q86WX3 136 aaKnown RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 SLC2A12Q8TD20 617 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 HAS2Q92819 552 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 RBM18Q96H35 190 aaKnown RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 ART5Q96L15 291 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 NPAS2Q99743 824 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 UTP23Q9BRU9 249 aaKnown RBP13.56□□□□□ -0.24
USP39-206ENST00000448971 FAIM2Q9BWQ8 316 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 SCN2AQ99250 2005 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 SETD2Q9BYW2 2564 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 C1orf226A1L170 272 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 AZIN1O14977 448 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 NPHS1O60500 1241 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 UROSP10746 265 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 PIK3R1P27986 724 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 SERPINB3P29508 390 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.24
USP39-206ENST00000448971 ALDH9A1P49189 494 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 TUBA3CQ13748 450 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 TUBA3EQ6PEY2 450 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 FAM180AQ6UWF9 173 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 ST13P4Q8IZP2 240 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 CDC26Q8NHZ8 85 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 PTPMT1Q8WUK0 201 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 FAR1Q8WVX9 515 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 MARVELD3Q96A59 401 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 APIPQ96GX9 242 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 CNPPD1Q9BV87 410 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 STMN4Q9H169 189 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 EML4Q9HC35 981 aaKnown RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 SSU72Q9NP77 194 aaKnown RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 TNFRSF12AQ9NP84 129 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 ZNF223Q9UK11 482 aaPredicted RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
USP39-206ENST00000448971 OSGIN2Q9Y236 505 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 CCDC168Q8NDH2 2452 aa13.55□□□□□ -0.24
USP39-206ENST00000448971 PRAMEF2O60811 474 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 ZFAND5O76080 213 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 GPR75O95800 540 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 CHRNGP07510 517 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 BPGMP07738 259 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 EDN3P14138 238 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 MLF1P58340 268 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 BIKQ13323 160 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 OR1C1Q15619 314 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 INAQ16352 499 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
USP39-206ENST00000448971 HSDL2Q6YN16 418 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 EXOC3L1Q86VI1 746 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 CHTF18Q8WVB6 975 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 UCN3Q969E3 161 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 KLHL29Q96CT2 875 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 PGM2Q96G03 612 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 PCDHA9Q9Y5H5 950 aa13.54□□□□□ -0.24
USP39-206ENST00000448971 HIVEP1P15822 2718 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 PGRMC2O15173 223 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 TM9SF1O15321 606 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ZG16O60844 167 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ITGA10O75578 1167 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ERAL1O75616 437 aaKnown RBP13.53□□□□□ -0.24
USP39-206ENST00000448971 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
USP39-206ENST00000448971 IL3P08700 152 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 STSP08842 583 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 NEFHP12036 1026 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SERPINB5P36952 375 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ETV4P43268 484 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SERPINB4P48594 390 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 TRA2BP62995 288 aaKnown RBP13.53□□□□□ -0.24
USP39-206ENST00000448971 ERVK-8P63133 956 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 SPRED3Q2MJR0 410 aa13.53□□□□□ -0.24
USP39-206ENST00000448971 ZNF766Q5HY98 468 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms